Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2121 ATGCCAACGCCCGTCGGAGTCGCCAGACAATGCTTAACAACGGAGGCCGCGCGTGCCCTCGACGAGGCAGTTACGGTTGCGCGGCGTCGCGGTCACGCGCAAACGACATCGCTTCACGCCGTTTCAGCTCTTCTCTCGCTACCGTCGTCGTCGATTCTCCGCGACGCGTGTTCCCGCGCGCGAAACTCGGCGTATTCTCCGCGGCTTCAGTTTAAAGCACTTGACCTTTGTCTCTCGGTTTCGCTTGACCGTGCTCCGTCTTCTCACAGCCACGTTTCATCTGAGCATGACCCTCCCGTTTCGAACTCTCTCATGGCTGCGATTAAACGGTCTCAGGCTAATCAACGGCGTCACCCTGATAACTTCCACTTCTATCACCAAAACCAACAGCAACAGCAGCAGCAACCGTTTTCTGTTTCTTCTGTTAAGGTTGAGCTTCAGCACTTGATTCTATCGATTCTCGATGACCCGGTGGTGAGTCGGGTTTTCGCTGAAGCGGGTTTTCGGAGCTCCGATATTAAGCTTGCTATTCTTCGTCCTCTGCCTCACATGTTCCGTTCCCGCGGCCCGCCGATTTTTCTTTGTAACTTGTCGGAGCCGCCGCGCCGGTTTCCGTTTTTTTCGAACTTCGGCGATGAGGATGACGGCGAGAATTTCAGGAGGATTGGGGAGCTTTTGGTTCGAAGTAGGGGGAGGAATCCGCTACTTCTCGGAGCGTGCGCGAGTGATGCGCTGCGAAGGTTTACTGAGGCGGTAGAGAAACGGAGGGAGGGGGTTTTGCCGTTGGAGCTTTCGGGGTTGCGCGTGGCTTGTATTGGGAAGGAGGTGGAGAGTGGTGATGTTGAGGTTGTGGGTTCGAGGGTGAAGGAGATTGGGCGAATGGCGGAGCACTGTGTGGGGCCTGGTGTGGTGGTGAGTTTGGGGGAGTTGAAGGGGTTTGTGAGAGAGGGTGGTGATGGTGATGGTGATGATGGTGTTATGAAGTGTGTGATTGGGGAATTGGGGAAGTTGTTGGAGGTTCATTATGATAAGTTTTGGTTGATCGGTGCTGCAGCTAGCTATGAGAGCTATTTGAAGTTTGTGGGCAGGTTTCCTTCTATAGAGAAAGATTGGGATTTGCAGATTCTGCCTATCACCTCTGTTAGGTCTTCTGAATCGTATCCGAGACCCAGGTCCAGCTTAATGGATTCATTTGTACCATTTGGTGGCTTTTTTTCATCACAGTCTGATTTAAAAGGTCCACTAAATGGCTCATTTTATTGTGTTCCCAACTGTCATCAGTGTGGTGAAAGGTGTGAGCATGAAGTCCTTACTGCTGCAAAGGAAAGATTTTCTGCTTCAGCTGCCGATCTGTGTCAATCTAACATGCCTCCGTGGTTGCAGATTGCTGAATTAGGCACAGCAAAAGGATTGAATGTTAAGACCAAAGATAATGGTGTTTTGCTGGATAGTGGTGAGTCTGGGCTCCCGCCTAAGAACTTGGGCAAGATGTGCCAGCATCTGCACCAGCGAATCCCTGATGCAAATACTTGTCCAACTGTTTTGGGGTTTCATTGTGTTGCTGACAATAAAAAGGAAGATGCCGAAAACTGCAGCAGCAAAATTACAGACAAATCACCTAGTGAATACATTAATCTCAACTCGCATGTACCCATTGGCATGAAAATGATGTCTACGTCACAATCAAGCAGTCCTTTTCCTGCAGTTTTCCAAGCCAAGCAGGGGAAACGTAGTTCAAAACTTGCTGATATGTTCCAGAAAATGGAAGATCACGAATCAGGTGACCTAAGATCATGCAACATGTCCAATTCAAGTGTGTGTGATGGTAGTGAAATGTCTCCCACATCTGTAACTTCTGTAACCACAGATCTTGGGTTAGGAATATGCTGTTCTCCTACCAGCAATAGATCAAAGAAACCAACTGCTCAATACTCAATGGAGCCTCCAAAGGAAATCCCCAGTAGATTTTCTTCAAACTTTAATTTGGTTGATGGGAATATCTTCAAGCATCCATCGGAATCTTCATCCTGCTTGAGTTTTGACTATTGTGGACAAGTTGATGCAAGAAATCCCAAAATTCTTTTTGAAGCTCTTTCCAAGGATGTAAGCTGGCAAGATGAAGCCTTACGGGCTATCGTCAAGACAATAGTCTGCAGCCCAACAAAAGGGGTTACACACCGTGGAGCAAATCAGCCAGGGATCATACGGATGAATTTTGTGGGACCTGATAGGCTCGGTAAAAAGAAAGTTGCCGTTTCTTTGGCTGAGTTATTGTATGGGAGCCGGGAAAACTTTATTTTTGTGAATCTAAGTTCTGAAGAAATGAAAAGATGCAATGTGAAATTCAGAGGGAAGACTACTCTTGATTTTATCGTAGGGGAGTGTTGCAAGAAACCCTTGTCTGTAGTTTTCCTTGAAAATGTAGACAAGGCAGATATTGTAGCTCAAAATAGCTTGTCTCAAGCCATCAAGACAGGAAAAATTACAGACTCACATGGACGAGAAGTTAGTGTAAACAACGCAATGTTTGTTTTTTCTTTCTTGGAATACCAAAATAGTTCGATGCTAACAGGGGAACCTTCCAACTACTCTGAGGAAAGAATACTGAGGGCAACGGGGGGAGGTATCAAGATAAAGGTTGAACAAGTGAATGGAGACACTAGAAGCCAAAGCATCAGTGTAGCTAACAGTTCAATAGACTCCATTCCTAATCAAATTTTCCTAACCAAACGAAAGTTGATTGGTGATAATGAATTTCATGACCCACATTTACTCTCTGATACGGCTAAAAGGGCACATACAACGTCAAATTGGCTTTTAGATTTGAATCTTCCAGCTGAAGAGAATGAACTGAAACAACCAAATGATGGAAACTCTGGACATGTCGCAACAGAGAACCAAAATCTTTGGTTACAAGTTTTGTGTGATCTGGTTCATGATACAGCTGTTTTTAAACCTTATGATTTTGATGCACTTGCGGGTAGAATTTTGAAACTGATCAAAAGTAACTTCAACAAAATTCTTGGACTCGAGTGTGCCTTGCAGATCCAGACAGAAGTCATGGACCAATTGCTTGCAGCACAATATGTCTCAGAGAGGGATAAGGAGGTGGAGAACTGGGTGGAGCAAGTTCTTTGTGAAGGGTTTACTGAAATACAGAGAAGGTACAACGTCTCTGCTAGTTCTATTGTGAAACTTACTACATGTCCAGAGCAAACTCCTTGTGTACACCTTCCCCCAAGGATAATTTTAGACTGA 3258 0.457 MPTPVGVARQCLTTEAARALDEAVTVARRRGHAQTTSLHAVSALLSLPSSSILRDACSRARNSAYSPRLQFKALDLCLSVSLDRAPSSHSHVSSEHDPPVSNSLMAAIKRSQANQRRHPDNFHFYHQNQQQQQQQPFSVSSVKVELQHLILSILDDPVVSRVFAEAGFRSSDIKLAILRPLPHMFRSRGPPIFLCNLSEPPRRFPFFSNFGDEDDGENFRRIGELLVRSRGRNPLLLGACASDALRRFTEAVEKRREGVLPLELSGLRVACIGKEVESGDVEVVGSRVKEIGRMAEHCVGPGVVVSLGELKGFVREGGDGDGDDGVMKCVIGELGKLLEVHYDKFWLIGAAASYESYLKFVGRFPSIEKDWDLQILPITSVRSSESYPRPRSSLMDSFVPFGGFFSSQSDLKGPLNGSFYCVPNCHQCGERCEHEVLTAAKERFSASAADLCQSNMPPWLQIAELGTAKGLNVKTKDNGVLLDSGESGLPPKNLGKMCQHLHQRIPDANTCPTVLGFHCVADNKKEDAENCSSKITDKSPSEYINLNSHVPIGMKMMSTSQSSSPFPAVFQAKQGKRSSKLADMFQKMEDHESGDLRSCNMSNSSVCDGSEMSPTSVTSVTTDLGLGICCSPTSNRSKKPTAQYSMEPPKEIPSRFSSNFNLVDGNIFKHPSESSSCLSFDYCGQVDARNPKILFEALSKDVSWQDEALRAIVKTIVCSPTKGVTHRGANQPGIIRMNFVGPDRLGKKKVAVSLAELLYGSRENFIFVNLSSEEMKRCNVKFRGKTTLDFIVGECCKKPLSVVFLENVDKADIVAQNSLSQAIKTGKITDSHGREVSVNNAMFVFSFLEYQNSSMLTGEPSNYSEERILRATGGGIKIKVEQVNGDTRSQSISVANSSIDSIPNQIFLTKRKLIGDNEFHDPHLLSDTAKRAHTTSNWLLDLNLPAEENELKQPNDGNSGHVATENQNLWLQVLCDLVHDTAVFKPYDFDALAGRILKLIKSNFNKILGLECALQIQTEVMDQLLAAQYVSERDKEVENWVEQVLCEGFTEIQRRYNVSASSIVKLTTCPEQTPCVHLPPRIILD* 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2121 1085 Gene3D - 10 179 IPR036628 -
Apr10g2121 1085 Pfam Clp amino terminal domain, pathogenicity island component 144 178 IPR004176 -
Apr10g2121 1085 ProSiteProfiles Clp repeat (R) domain profile. 8 183 IPR004176 -
Apr10g2121 1085 PANTHER CHAPERONE PROTEIN CLPD, CHLOROPLASTIC 1 1083 - -
Apr10g2121 1085 PANTHER PROTEIN SMAX1-LIKE 8 1 1083 - -
Apr10g2121 1085 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 694 846 IPR027417 -
Apr10g2121 1085 Gene3D - 676 873 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2121 Apr-Chr10 33873789 33879720 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2121 - - gmx:100800606 1707.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr8g0663 8 6178568 6182337 Apr10g2121 10 33873789 33879720 ECH
Apr10g2121 10 33873789 33879720 Apr10g2121 10 33873789 33879720 ECH