Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g2024 ATGACGACGAAGCGTAGTAATGAGGAGGTTGTGAGAAACCTTCAGAAGAAAATTGAAATCCAGAAACAGAAAATTACTGATGTGGAGCATAAAAATACAGAGAAAGCTGATTGTATGAGCAAACTCAACGAATCCGTCAACGTGGTTATGGAAATAATGAAGAAGAAAAATAAGCTGCATGAGGAATGTCAGAAAGAATTACAACAAATTAAGGTCATGAACTCTATTATGGGATATGACATGGAATGTTTAAAGAAAGAGCACAGGAAGATCACCAAGGAATTGGAGGAGAGTAAGGCTCTAAATGATCTGCAGCAGAAGAACTTTGCCGAGGAGATTCAACAGAAAGTAATGCAAATTAGCTCTCTTCAGATGGGTGCTCTGAAACATCAGAATGATGATAAAAATGTTTCAAAATTGACTGAAGATTTTAGGACGGTGGATGCTTTACCTATGAATATATGGGAAAAGGAAGGGTCCCTTCAAGAGTTGGAAGATTTTAACCTATCACTAATCATTAAAGAACGTGCGAACAATGATGAGCTTCAGAATGCTCGAAAAAAATTGATTCAGTTACTTTCCATTCTCTTGCAGGGCATTGCAGAGACATCAAGCTCTCGTGCCAAAATTGGTATAAAGAGAATGGGGGAAGTAGACATTAAGCCTTTTCTTGAAGCTTTGAGATCGATGAAAAGATATTATAAGGATGAAGCCGCGGAGTTGTGTTCATTATGGCAAAAGAATGTGGAGGACCCCCGTTGGTATCCATTCAAAATAATCACACTTGATGGCAAATTCCACGAAATAATAGATGATAAAGATGAAAAGCTGAGAACACTGAAAATAACGTGGGGTGATGGAGTGTATGATGCAGTGGTGACAGCTTTGAAAGAGATGAATGAATGTAATCCAAGTGGGAGGTATGTAATATCTGAACTGTGGAACCAAAAGAAAAGAGAGAGAGCAACCTTGGAAGACGGAATCGAATTTCTATTGAGCCAAAGGAAAACCAGAAAAAGGAAAATAGATCATGCATGGAGTAAGGATGATAGTTTGTATGATAGTTTGTTTGGCTAG 1077 0.3807 MTTKRSNEEVVRNLQKKIEIQKQKITDVEHKNTEKADCMSKLNESVNVVMEIMKKKNKLHEECQKELQQIKVMNSIMGYDMECLKKEHRKITKELEESKALNDLQQKNFAEEIQQKVMQISSLQMGALKHQNDDKNVSKLTEDFRTVDALPMNIWEKEGSLQELEDFNLSLIIKERANNDELQNARKKLIQLLSILLQGIAETSSSRAKIGIKRMGEVDIKPFLEALRSMKRYYKDEAAELCSLWQKNVEDPRWYPFKIITLDGKFHEIIDDKDEKLRTLKITWGDGVYDAVVTALKEMNECNPSGRYVISELWNQKKRERATLEDGIEFLLSQRKTRKRKIDHAWSKDDSLYDSLFG* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g2024 358 Coils Coil 4 31 - -
Apr10g2024 358 Coils Coil 81 101 - -
Apr10g2024 358 Pfam XH domain 213 341 IPR005379 -
Apr10g2024 358 PANTHER RIBONUCLEASE P SUBUNIT P38 147 341 IPR045177 GO:0080188
Apr10g2024 358 PANTHER RIBONUCLEASE P SUBUNIT P38 4 143 IPR045177 GO:0080188
Apr10g2024 358 Coils Coil 172 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g2024 Apr-Chr10 33080761 33083856 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g2024 - - ccaj:109816718 301.212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g1340 9 23000291 23008488 Apr10g2024 10 33080761 33083856 ECH
Apr10g2024 10 33080761 33083856 Apr10g2024 10 33080761 33083856 ECH
Apr10g2024 10 33080761 33083856 Apr9g1340 9 23000291 23008488 PCT