Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1371 ATGGCAGCAGCTTCAGAAAGGTATGCAGTTGTGACTGGTGCAAACAAAGGAATTGGATTAGAGATTGTTAGGCAACTAGCTTTAGCTGGGATCAAAGTGGTGCTCACAGCAAGAGATGAGAAAAGGGGTCTTCATGCATTGGAAGCGCTCAAAGATTCAGGTCTATCTCACCTTGTAGTTTTCCATCAGCTCGATGTGGCTGATCGTACAAGTGTAGCTTCTCTTGCAGATTTTATCAAATCTAAATTTGGGAAGCTTGATATTCTGGTGAACAATGCAGGAGTTACTGGATCCATAGTTGATGCTGACCGGGAAAAAGCATTCACTGAAACATATGAATTAACTGAAGAGTGTTTGCAAATAAATTACTATGGTGCTAAGAGAACAGCCGAGTCCCTTTTACCCCTCTTGCAATTATCTGATTCACCAAGAATTGTGAATGTATCATCTGGCTGGGGAAAATTAGAGAGATTATCAAATGAATGGGCTAAAGGAGTCCTCAGTGATGCTGAGAATCTTACAGAAGAGAGAGTGGATGAAGTATTGAAGGAGTTTCTCAAAGATTTCAAAGAAGGGTCATTAGAAAGCAAGGGATGGCCTAAGCATGCTGGTGTCTATATGATTTCTAAAGCTGCATTGAATGCCTATACAAGAATTCTTGCTAAGAAGTACCCTAATTTCCTCATCAATAGTGTTTGCCCTGGTTTTGTCAAGACAGATATAAATGGCAACAGTGGAGTTTTAACAGTTGAAGAAGGTGCTGCAAGTCCTGTGAGGGTGGCATTGCTACCCAATGATGGTCCATCTGGCATACTCTATATTCGAAGTGAAGTCTCTTCCTTTTGA 846 0.4102 MAAASERYAVVTGANKGIGLEIVRQLALAGIKVVLTARDEKRGLHALEALKDSGLSHLVVFHQLDVADRTSVASLADFIKSKFGKLDILVNNAGVTGSIVDADREKAFTETYELTEECLQINYYGAKRTAESLLPLLQLSDSPRIVNVSSGWGKLERLSNEWAKGVLSDAENLTEERVDEVLKEFLKDFKEGSLESKGWPKHAGVYMISKAALNAYTRILAKKYPNFLINSVCPGFVKTDINGNSGVLTVEEGAASPVRVALLPNDGPSGILYIRSEVSSF* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1371 281 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Apr10g1371 281 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Apr10g1371 281 PRINTS Glucose/ribitol dehydrogenase family signature 137 153 IPR002347 -
Apr10g1371 281 PRINTS Glucose/ribitol dehydrogenase family signature 206 225 IPR002347 -
Apr10g1371 281 PRINTS Glucose/ribitol dehydrogenase family signature 225 242 IPR002347 -
Apr10g1371 281 PRINTS Glucose/ribitol dehydrogenase family signature 257 277 IPR002347 -
Apr10g1371 281 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Apr10g1371 281 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 143 151 IPR002347 -
Apr10g1371 281 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 206 225 IPR002347 -
Apr10g1371 281 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 281 - -
Apr10g1371 281 PANTHER SALUTARIDINE REDUCTASE-LIKE 1 281 - -
Apr10g1371 281 CDD carb_red_PTCR-like_SDR_c 7 281 IPR045313 GO:0016616
Apr10g1371 281 Gene3D - 2 281 - -
Apr10g1371 281 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 266 IPR036291 -
Apr10g1371 281 Pfam short chain dehydrogenase 8 155 IPR002347 -
Apr10g1371 281 Pfam Enoyl-(Acyl carrier protein) reductase 196 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1371 Apr-Chr10 25966799 25969579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1371 9 242 Miscellaneous Gene Families AT2G29150 29.114 5.21e-12 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1371 K15095 - gmx:102663482 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1371 10 25966799 25969579 Apr10g1371 10 25966799 25969579 ECH
Apr10g1371 10 25966799 25969579 Apr4g2204 4 31115742 31117713 PCT