Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1325 ATGTTTGAAGTTGGAGCTATATATAGTGTGGTCTTTGTGTTTCTGTTTGCTGTTACTTTGGTGTTGGGTGGTGATATAGTTCACCATGATGATGTTGCCCCTAGAAGGCCTGGTTGCGAGAACAACTTTGTTCTGGTAAAAGTCCCTACTTGGATTGATGGTGTGGAAAGCAATGAATATGTTGGTGTTGGTGCAAGATTTGGCCCCACATTGGAATCAAAAGAAAAACGTGCCAATCTTACTAGAGTTGTCATGGCTGATCCTCCTGATTGTTGTACACCGCCTAAGAATAAGCTCACCAGCCAGATCATTTTGGTGCACCGAGGAAAATGTAGTTTCACTACCAAAGCAAATATAGCTGATGAAGCTGGTGCTTCTGCCATCCTTATTATAAACTACCGTACAGAGCTTTTCAAGATGGTTTGCGAAGAAAATGAAACTGATGTTGATATTAACATACCTGCTGTTATGCTTCCACAAGATGCTGGATTGAACTTGGAAAGGCATATTGAAAACAACTCCAATGTGTCCATACAGTTATACTCTCCACTTCGTCCTTTGGTTGATGTTGCGGAAGTGTTTTTGTGGCTTATGGCTGTTGGTACCATTTTGTGTGCTTCTTATTGGTCTGCCTGGAGTACAAGAGAAGCAGTTATCGAGCAAGAGAAGCTTTTAAAGGATGCTTCAGATGATTATGCTAATGCAGAAAATGTTGGTTCTAGTGGCTATCTGGAAATCAGTACTGCAGCAGCAGTTTTATTTGTTGTGATTGCTTCTTGTTTCTTGGTTATGCTGTACAAATTAATGTCATTCTGGTTTGTTGAAGTTCTGGTGGTTCTATTCTGCATTGGTGGGGTAGAGGGGCTGCAAACTTGTTTGGTGGCTCTGTTATCATGTTTCAGATGGTTTCAACATCCTGCACAAACATTTGTGAAGATACCTTTCTTTGGAGCTGTTTCATATCTGACACTTGCTGTTACTCCCTTCTGCATTGTGTTTGCTGTGGTTTGGGCAGTTTATCGCCGTGCATCATATGCTTGGATTGGTCAAGATATTCTTGGTATTACATTGATAATTACAGTTCTTCAGATTGTTCGCATACCAAATCTCAAGGTTGGAACTGTTCTTCTTAGTTGTGCTTTCCTGTATGACATCTTCTGGGTGTTTGTTTCTAAATGGTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGAGGTGATAAGAGTGGAGAAGATGGTATCCCCATGCTCCTCAAGATACCACGTCTGTTCGATCCTTGGGGCGGTTACAGTATCATTGGATTTGGGGACATAATCTTGCCAGGACTTATAGTAGCATTTTCACTAAGGTATGATTGGTTGGCAAAGAAGAACCTTCGGGCTGGATACTTCTTGTGGGCAATGACTGCTTATGGTTTAGGTCTCCTTATCACATATGTGGCTTTGAACTTGATGGATGGGCATGGTCAGCCAGCTTTGCTGTATATAGTCCCATTTACTCTTGGCACGTTTTTGTCATTGGGAAAGAAGAGAGGAGAACTGAAGATTTTATGGACAAGAGGGGAACCAGAAAGGCCTTGCCCACATATCCAAGAGGATAACCATTCAATTAACCACCATTGA 1623 0.4177 MFEVGAIYSVVFVFLFAVTLVLGGDIVHHDDVAPRRPGCENNFVLVKVPTWIDGVESNEYVGVGARFGPTLESKEKRANLTRVVMADPPDCCTPPKNKLTSQIILVHRGKCSFTTKANIADEAGASAILIINYRTELFKMVCEENETDVDINIPAVMLPQDAGLNLERHIENNSNVSIQLYSPLRPLVDVAEVFLWLMAVGTILCASYWSAWSTREAVIEQEKLLKDASDDYANAENVGSSGYLEISTAAAVLFVVIASCFLVMLYKLMSFWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWFQHPAQTFVKIPFFGAVSYLTLAVTPFCIVFAVVWAVYRRASYAWIGQDILGITLIITVLQIVRIPNLKVGTVLLSCAFLYDIFWVFVSKWWFHESVMIVVARGDKSGEDGIPMLLKIPRLFDPWGGYSIIGFGDIILPGLIVAFSLRYDWLAKKNLRAGYFLWAMTAYGLGLLITYVALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGEPERPCPHIQEDNHSINHH* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1325 540 Coils Coil 218 238 - -
Apr10g1325 540 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 6 540 - -
Apr10g1325 540 PANTHER SIGNAL PEPTIDE PEPTIDASE 6 540 IPR007369 GO:0004190|GO:0016021
Apr10g1325 540 SMART psh_8 242 511 IPR006639 GO:0004190|GO:0016021
Apr10g1325 540 SUPERFAMILY PA domain 98 136 IPR046450 -
Apr10g1325 540 Pfam Signal peptide peptidase 244 522 IPR007369 GO:0004190|GO:0016021
Apr10g1325 540 Pfam PA domain 89 166 IPR003137 -
Apr10g1325 540 Gene3D - 40 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1325 Apr-Chr10 25584316 25593658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1325 K09597 - gmx:100795197 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1325 10 25584316 25593658 Apr10g1325 10 25584316 25593658 ECH
Apr4g2239 4 31409545 31417266 Apr10g1325 10 25584316 25593658 PCT