Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g1032 ATGAATAAATTATTAGGAGTGACCGACCATACAAGCCATGGTGGCCTAAAATGGAGAATCTTAGAGTTGATTCAAATATGCACTATTATTATATGGATTGCTTCGGCTCTCCATGTAGCTGTTAATTTTGGACAATACCCTTATGGAGGTTTTATTTTGAACCGTCCAACTCTTACCCGAAGATTGATCCCAGAACCAGGAAGTAAAGAATATGATGAGATGGCTAAAAACGATCAAAAGGCTTATTTGAGAACAATTACAGGAAAGTATGAGGCCCTTGTTGACCTTTCAGTGATAGAGATATTGTCAAGACATGCTTCTGATGAGATCTACCTTGGACAAAGGAACAATCGAACTTGGACATCTGATGGAAAGGCCATTGAAGCCTTTGATAGGTTTGGACAAAAGCTAGCAGAAATCGAGTCCAAGATCTCAGGAAGAAACCGTGCAAGTCTTAGAAACCGAAATGGACCTCTTAATTTGCCTTACACTGTGCTTCTTCCAACCAGCAAGGAAGGGTTGACCTTCAGAGGCATTCCTAACAGCATCTCTATCTAA 558 0.4032 MNKLLGVTDHTSHGGLKWRILELIQICTIIIWIASALHVAVNFGQYPYGGFILNRPTLTRRLIPEPGSKEYDEMAKNDQKAYLRTITGKYEALVDLSVIEILSRHASDEIYLGQRNNRTWTSDGKAIEAFDRFGQKLAEIESKISGRNRASLRNRNGPLNLPYTVLLPTSKEGLTFRGIPNSISI* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g1032 185 Pfam Lipoxygenase 22 168 IPR013819 GO:0016702|GO:0046872
Apr10g1032 185 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 1 185 IPR013819 GO:0016702|GO:0046872
Apr10g1032 185 SUPERFAMILY Lipoxigenase 22 185 IPR036226 -
Apr10g1032 185 PANTHER LIPOXYGENASE 21 185 IPR000907 GO:0016702|GO:0046872
Apr10g1032 185 Gene3D - 8 184 - -
Apr10g1032 185 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 21 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g1032 Apr-Chr10 22719090 22720542 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g1032 22 185 Acyl Lipid Metabolism Gene Families AT3G22400 54.706 2.05e-60 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g1032 K15718 - gmx:100127399 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g1032 10 22719090 22720542 Apr2g2410 2 28714678 28723104 PCT