Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0805 ATGCAGAGATTCCATTTGGGTCTCTCTCAAAACCTCCCTTTGATGATGGATTCAGCTTCATCCCATTTGTCTCTCCAAAACCCAAAAACACCCTTCCAAGACCCTCCAGAAGCTTCTCCAAAGCCTTACAAGAAGGGCTTTGTGGCCACTCTAATGGGAGCTTCAACCCCTTCTTTCAAAGAAGATAACTACTTTGTTTCCCTTCTCAAGTCTTCAGAGAAAAAAGCCCTTCAGGAGCTGAAAGACAAGCTCAAAGCTTCATTTGATGAGGCTCCTTCTGATGCCTCCATGTGGGGCATTCCTCTCCTTGGAGGTGATGATAAAGCGGATGTTGTTCTCTTGAAGTTTCTTAGAGCAAGGGACTTCAGGGTTGGTGATGCTCTTAACATGCTTCTCAAGTGCTTGGCTTGGAGGAAGGAGTTTGGTGCTGACAGCATTTTGGAAGAGGATTTGGGGTTCAAAGAGCTTGAAGGAGTTATAGCTTATATGCAAGGGTATGATAGAGAGGGACACCCTGTGTGTTACAATGCTTATGGTGTGTTTAGGGACAAGGACATGTATGAGAGGGTCTTCGGTGATGAAGAGAAGCTGAAGAAGTTCCTTAGGTGGAGGGTTCAAGTCCTTGAAAGAGGCATCAAGCTTTTACATTTCAAGCCTGGTGGGGTCAACTCTCTCATTCAGGTCACCGACCTCAAAGACATGCCCAAGAGAGAGCTGAGAGTTGCTTCCAACCAGATCCTCTCACTCTTCCAAGACAACTACCCTGAAATGGTGGCTCGCAAGATTTTCATCAACGTGCCTTGGTACTTCAGCATGTTGTATTCCATGTTCAGTCCATTTCTGACTCAAAGAACTAAGAGCAAGTTCGTGATCTCTAAGGAAGGAAATGCTGCAGAGACACTCTATAAATTTATGAGGCCTGAAGATATTCCTGTTCAGTATGGAGGACTGAATCGACCCAGTGATTTGCAGAATGGTCCCCCAAAACCTGCATCTGAGTTCACAGTCAAGGGAGGCGAGAGAGTGAACATACAAATAGAAGGAATTGAGGCTGGTGCCACTATCACGTGGGACATTGTGGTTGGAGGGTGGGACTTAGAATACAGTGCTGAGTTTGTCCCAAATGCTCAAGGAAGCTACACCATAGCAGTTGAAAAGCCAAGGAAGATTGGATCTTCAGAAGAAGCAATCCACAACTCATTCACATCAAAAGAATCTGGCAAAATGGTCCTCTCTGTTGATAACACTGCCTCAAGGAGGAAAAAGGTTGCTGCATATCGCTATGTTGTCCGCAAAAGCAGCACCACTTGA 1311 0.4554 MQRFHLGLSQNLPLMMDSASSHLSLQNPKTPFQDPPEASPKPYKKGFVATLMGASTPSFKEDNYFVSLLKSSEKKALQELKDKLKASFDEAPSDASMWGIPLLGGDDKADVVLLKFLRARDFRVGDALNMLLKCLAWRKEFGADSILEEDLGFKELEGVIAYMQGYDREGHPVCYNAYGVFRDKDMYERVFGDEEKLKKFLRWRVQVLERGIKLLHFKPGGVNSLIQVTDLKDMPKRELRVASNQILSLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFLTQRTKSKFVISKEGNAAETLYKFMRPEDIPVQYGGLNRPSDLQNGPPKPASEFTVKGGERVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPNAQGSYTIAVEKPRKIGSSEEAIHNSFTSKESGKMVLSVDNTASRRKKVAAYRYVVRKSSTT* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0805 436 Pfam CRAL/TRIO, N-terminal domain 76 132 IPR011074 -
Apr10g0805 436 SMART CRAL_TRIO_N_2 109 134 IPR011074 -
Apr10g0805 436 Gene3D - 65 335 IPR036865 -
Apr10g0805 436 PANTHER PATELLIN-6 29 434 - -
Apr10g0805 436 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 333 432 IPR036598 -
Apr10g0805 436 Pfam CRAL/TRIO domain 157 316 IPR001251 -
Apr10g0805 436 SUPERFAMILY CRAL/TRIO N-terminal domain 69 150 IPR036273 -
Apr10g0805 436 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 148 322 IPR001251 -
Apr10g0805 436 Gene3D GOLD domain 336 430 - -
Apr10g0805 436 PANTHER PATELLIN-1 29 434 IPR044834 GO:0008289
Apr10g0805 436 SMART sec14_4 155 319 IPR001251 -
Apr10g0805 436 ProSiteProfiles GOLD domain profile. 298 432 IPR009038 -
Apr10g0805 436 CDD SEC14 153 317 IPR001251 -
Apr10g0805 436 SUPERFAMILY CRAL/TRIO domain 154 319 IPR036865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0805 Apr-Chr10 20058525 20061597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0805 113 311 Acyl Lipid Metabolism Gene Families AT1G55840 27.230 1.82e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0805 - - gmx:100809944 774.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0805 10 20058525 20061597 Apr10g0805 10 20058525 20061597 ECH
Apr4g2091 4 29785798 29788382 Apr10g0805 10 20058525 20061597 PCT