Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0719 ATGTTCGCTCATCGGCTGCATAAACATACCAAGCTATCTATCTTCTCTCTAATCACATTCTCAGCCATAATATTTCTTATCCATGCAGATAGTATTATCTACCATGATTCGCTACACTCTAAGGCTATTACAAGAGAACCAGAGAAGTTGCAAGTTCACAATCCTAGCAGCAGAGAAGGAATAAGTTTAAGACTTACCCACATACCTTTACATTCCATTCAAGAGAAGGATGAAGCTGAAACAAATCAGAATGCTCTAGTTGCTCCATTGAATGTCACAGAAGAAGAAAGAATAACTTGGTTTCGAGAACACCTGCATAAGTTCAAGATTCTCAACTCAAGCAACTTGACCAGACAATTTCATGCTCGGGTTTTAGGATTTTTCAGCCAAGAATGTCAGGCTCAGTTTTTTATGACTTGGATTTCACCTGCAAGGTTATTTGGAGGAAGAGAATTGCTGTCTGTAGAAAGTGTTTTCAAGGTCCATCCTAAGGCATGTCTAATAATTCTATCAAGAACTTTGGACACCAGACACGGCTACAGGATCCTGAAACCACTGCTTGATTGCGGGTTCAAAGTTCAGGCAGTGACCCCAGACTTGTCATTTTTGTTTAAGAGGACACCCGCTGAAGCTTGGTTTCGTGAGTTAAGGAAAGGTAGAAAGGACCCTGGTGAGATTTCTCTGTCTCAGAATCTATCTAATTTAATAAGACTTGCAGTTCTCTACAAATATGGTGGTGTCTACATAGACACAGATTTTATAGTGCTAAAACCCTTAACAAGGTTAAGGAATTCTATTGGTGCACAAAGCATGAATTTGGGTTCCACACACTGGAGTAGATTGAATAATGCTGTTTTGATTTTTGATATGAGACATCCACTTCTACACAGATTCATCAACGAGTTTGCATTGACTTTTGATGGAAACAAATGGGGGCATAATGGCCCCTACTTGGTTTCCCGAGTGATTAAGAGGCTGGGGAAAAAACATGATTTCAACCTCACAATCTTGCCTCCTGTGGCCTTTTATCCAGTGGATTGGAATAAGATAAGTGGGCTCTTTATGAAGCCAAATACTCAGGGTGAATCAAGATGGGTAGAAGCTAAACTTCTTCAGCTTAGTGGGAAGACTTATGGGGTTCATCTATGGAACAAACACAGTAGCAGATTGACAATTGAAGAAGGAAGTGTCATAGGAAGACTAGTATCAAATCACTATGTCATTTGTAACCATACATATAGTTCTTAG 1248 0.3966 MFAHRLHKHTKLSIFSLITFSAIIFLIHADSIIYHDSLHSKAITREPEKLQVHNPSSREGISLRLTHIPLHSIQEKDEAETNQNALVAPLNVTEEERITWFREHLHKFKILNSSNLTRQFHARVLGFFSQECQAQFFMTWISPARLFGGRELLSVESVFKVHPKACLIILSRTLDTRHGYRILKPLLDCGFKVQAVTPDLSFLFKRTPAEAWFRELRKGRKDPGEISLSQNLSNLIRLAVLYKYGGVYIDTDFIVLKPLTRLRNSIGAQSMNLGSTHWSRLNNAVLIFDMRHPLLHRFINEFALTFDGNKWGHNGPYLVSRVIKRLGKKHDFNLTILPPVAFYPVDWNKISGLFMKPNTQGESRWVEAKLLQLSGKTYGVHLWNKHSSRLTIEEGSVIGRLVSNHYVICNHTYSS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0719 415 Pfam Alpha 1,4-glycosyltransferase conserved region 288 413 IPR007652 -
Apr10g0719 415 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 415 IPR044789 -
Apr10g0719 415 Pfam Glycosyltransferase sugar-binding region containing DXD motif 150 270 IPR007577 -
Apr10g0719 415 PANTHER ALPHA 1,4-GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 415 - -
Apr10g0719 415 Gene3D - 171 337 - -
Apr10g0719 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 95 413 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0719 Apr-Chr10 18078482 18081807 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0719 11 415 Glycosyltransferase AT2G38150 48.049 2.88e-136 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0719 K01988 - gmx:100781975 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0719 10 18078482 18081807 Apr10g0719 10 18078482 18081807 ECH
Apr4g2009 4 28756144 28757400 Apr10g0719 10 18078482 18081807 PCT