Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0127 ATGGAGAAAACAATGCACATAGCAGTTATTCCAAGCGCAGGGTTCAGCCACTTAGTGCCCATTCTCCAATTCTCCAGGAGACTTGTTGAGCTCCATCCAGAGATCCATGTCACATGCATCATTCCCACACTTGGGTCTCCACCAAGTGCCTCGAAAACCATTCTTGAAACTCTTCCACCAAACATCAACTCCATTTTTCTCCCACCAGTGAACCCCAAGGACCTTCCACAAGGGCTTCCTATGGCAGCCCAATTTCAGCTAGCAGTGACTCACTCTTTATCATCTATACATGAAGCCTTGAAGTCCTTAACTTTAAGGACACCCTTTTTGGCCATGGTGGTTGATTCTTTTGCTGCAGTAGCACTAGATTTCGCACATGAGTTCAACATGTTGTCTTATATTTACTTCCCTGCAGCAGCTACCACACTCTCTACACACTTCTATTTGCTAAAGTTGGATGAAGAAACTTCATGTGAGTGTAGAGATTTGGTAGAACCTATCAAAGTACCAGGTTGTGTACCATTTCATGGTAAGGATCTCTATACCCAAGCTCAAGATAGAACAAGTCAATTTTACAAACTCTCACTCCAACGTTACAAAAGATTTTTTGGTGTCAATGGGATTTTTGTGAATAGCTTCTTAGGAATGGAAAGAGGTCCTATAAAAGCATTGACTGAGGAGGGAAGTGGCAAGCCTCCTGTGTATGCTGTTGGACCCATTATCCAAACGGATAAAGGTTGTGGTAATGATGCAAATGCAATAGAGTGTGTTGCATGGTTGGATAGACAACAACCTTCTTCTGTGTTGTACGTTTGTTTTGGAAGCGGTGGAACATTGTCACATGAACAAATGATTGAGTTGGCTTATGGTTTGGAATTGAGTGGTCATAAGTTCTTGTGGGTTGTAAGAGGACCTAGTAATACACCTAATGCTACATATCTTGATGCACAAAATGGTGTTAACCCATTGAAGTTCTTGCCATTTGGGTTCTTAGAGAGAACCAAAGAGCAAGGTATGGTTATTCCTTCATGGGCACCCCAAGTTCAAGTGCTTGGACATAGTTCAATTGGAGGGTTCTTGAGTCATTGTGGATGGAATTCAACACTTGAGAGTGTGGTGCAAGGTGTGCCACTAATCACGTGGCCTTTGTTCGCAGAGCAAAGAATGAATGCAGTTGTGCTGAGTGAGGGCCTCAAAGTGGGCCTAAGGCCAAGAGTTAGTGAAAATGGGTTGATTGAAAAGGTAGAAATTGCTAAGGTGATAAAAGGTCTAATGGAAGGGGAAGAAGGTAAGGAAATGCTCAAGAGAATGAAGAAGTTGAAAGAAGATGCCATTAGTGCACTCAAAGAAGATGGCTCTTCTGCAAAGACCATTTCTCAGTTGGTACAAAAGTGGAAAACTTTGCCATAA 1410 0.4248 MEKTMHIAVIPSAGFSHLVPILQFSRRLVELHPEIHVTCIIPTLGSPPSASKTILETLPPNINSIFLPPVNPKDLPQGLPMAAQFQLAVTHSLSSIHEALKSLTLRTPFLAMVVDSFAAVALDFAHEFNMLSYIYFPAAATTLSTHFYLLKLDEETSCECRDLVEPIKVPGCVPFHGKDLYTQAQDRTSQFYKLSLQRYKRFFGVNGIFVNSFLGMERGPIKALTEEGSGKPPVYAVGPIIQTDKGCGNDANAIECVAWLDRQQPSSVLYVCFGSGGTLSHEQMIELAYGLELSGHKFLWVVRGPSNTPNATYLDAQNGVNPLKFLPFGFLERTKEQGMVIPSWAPQVQVLGHSSIGGFLSHCGWNSTLESVVQGVPLITWPLFAEQRMNAVVLSEGLKVGLRPRVSENGLIEKVEIAKVIKGLMEGEEGKEMLKRMKKLKEDAISALKEDGSSAKTISQLVQKWKTLP* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0127 469 Coils Coil 431 451 - -
Apr10g0127 469 ProSitePatterns UDP-glycosyltransferases signature. 344 387 IPR035595 -
Apr10g0127 469 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 465 - -
Apr10g0127 469 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 265 442 IPR002213 GO:0008194
Apr10g0127 469 PANTHER GLYCOSYLTRANSFERASE 1 468 - -
Apr10g0127 469 Gene3D Glycogen Phosphorylase B; 250 449 - -
Apr10g0127 469 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 468 - -
Apr10g0127 469 CDD GT1_Gtf-like 5 442 IPR002213 GO:0008194
Apr10g0127 469 Gene3D Glycogen Phosphorylase B; 6 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0127 Apr-Chr10 3353741 3355187 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0127 3 467 Glycosyltransferase AT1G01420 46.352 2.50e-153 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0127 K08237 - gmx:100800142 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0127 10 3353741 3355187 Apr10g0081 10 1848071 1849991 PCT