Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0081 ATGGCAAAAGCAACTCACATAGCTATTGTTCCGAGTCCTGGTTTTAGCCACCTAGTCCCAATAGTTGAGTTTAGCAAGCGACTTGTGCAGCATCACCCAAATTTTCATGTCACTTGCATCATTCCCTCACTTGGGTCACCCCCAGATTCCTCCAAAGCCTACGTTAAAACCCTTCCTTCAAACATAGACTTCATCTTCCTTCCTCCAATTAACAAAGACCAATTACCCCAAGGAGCATACCCTGGGGTCCTAATCCAACTCACTATTACTTTCTCGCTGCCATCAATACACGAGGTCCTAAAATCCTTGTCCTCTAAAGCCCCTTTAACTGCTTTGATGGTAGATGTTTTTGCATTTCAAGCATTGGATTTTGCAAAGGAGTTCAATGCTTTGTCCTACATTTACTTCCCTGGTGCAGCTATGGTACTGTCGCTGTTTTCACAAATGCCAAAACTAGATGAGCAAATTTCAGGTGAGTACAAAGACTTAAAAGAACCTATAGCGTTACCAGGTTGTGTTCCACTACAGGGGAGTGATCTTCCAGCTCCAACCCAAGATCGATCGAGCGAAACTTACAAACTTTTTCTTGAACGTGCCAAAGGAATGCTTTTAGCTGATGGAATATTGATCAATAGCTTCCTAGAAATGGAATCAAGTGCTATAAGAGCATTGGAAGAGGAAGAAAATAACAAGATCAAAGTTTACCCTGTGGGACCCATTACACAGAAAGGGTCAAACAAGGATGCTGATGAGTGTTTACGATGGTTGGACAACCAGCCACCTAGTTCAGTGTTGTATGTTTCTTTTGGAAGTGGTGGAACACTCTCTCAAGACCAAACCAATGAACTAGCTTTGGGTTTGGAATTGAGTGGTCAAAGGTTCTTGTGGGTTTTGAGAGCACCAAGTAATTCAGTTAGTGCTGCTTACCTTGAGACTGTAAATGAGGACCCTTTGCAGTTCCTACCAAATGGGTTTTTGGAAAGGACTAAAGAGCAAGGCTTGGTTGTGCCTTTGTGGGCACCTCAAGTTCAAGTCCTTAGTCATAAATCAGTGGGTGGGTTCCTATGCCATTGTGGTTGGAATTCGATTCTGGAGAGTGTGCAAGAGGGAGTGCCACTAATAACATGGCCACTCTTTGCTGAACAAAGGATGAATGCAGTGATGTTAACGGATGGACTTAAAGTAGCATTAAGGCCAAAGGTTAACGAAGATGGCATAGTGGAAAAGGAGGAAATCGCTAAGGTCATGAAGTGTCTTATGGAAGGAGAAGAAGGTAAAGGAATGCGTGAAAGAATGAGGAAGCTAAAAGATTCTGCTGCTAATGCACTGAAAGATGGTTCTTCAACACAGACCCTATCTCAGTTGGCTAGCCAATGGGAAAATTATGGTGCGATTTTGGAAAATAAATTTTCTTAA 1416 0.4258 MAKATHIAIVPSPGFSHLVPIVEFSKRLVQHHPNFHVTCIIPSLGSPPDSSKAYVKTLPSNIDFIFLPPINKDQLPQGAYPGVLIQLTITFSLPSIHEVLKSLSSKAPLTALMVDVFAFQALDFAKEFNALSYIYFPGAAMVLSLFSQMPKLDEQISGEYKDLKEPIALPGCVPLQGSDLPAPTQDRSSETYKLFLERAKGMLLADGILINSFLEMESSAIRALEEEENNKIKVYPVGPITQKGSNKDADECLRWLDNQPPSSVLYVSFGSGGTLSQDQTNELALGLELSGQRFLWVLRAPSNSVSAAYLETVNEDPLQFLPNGFLERTKEQGLVVPLWAPQVQVLSHKSVGGFLCHCGWNSILESVQEGVPLITWPLFAEQRMNAVMLTDGLKVALRPKVNEDGIVEKEEIAKVMKCLMEGEEGKGMRERMRKLKDSAANALKDGSSTQTLSQLASQWENYGAILENKFS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0081 471 PANTHER GLYCOSYLTRANSFERASE 1 463 - -
Apr10g0081 471 ProSitePatterns UDP-glycosyltransferases signature. 339 382 IPR035595 -
Apr10g0081 471 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 463 - -
Apr10g0081 471 Gene3D Glycogen Phosphorylase B; 6 448 - -
Apr10g0081 471 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 460 - -
Apr10g0081 471 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 397 IPR002213 GO:0008194
Apr10g0081 471 Gene3D Glycogen Phosphorylase B; 250 444 - -
Apr10g0081 471 CDD GT1_Gtf-like 6 440 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0081 Apr-Chr10 1848071 1849991 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0081 6 462 Glycosyltransferase AT1G01420 48.817 2.23e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0081 K08237 - gmx:100777345 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0127 10 3353741 3355187 Apr10g0081 10 1848071 1849991 PCT