Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0086 ATGGAGAAACCACACATAGCAGTAGTTCCTAGTGCTGGCTTCACTCATTTGGTTCCAATTCTTGAGTTCTCCAAACGCCTCCTTCATCTCTACCCAGAATTCCATGTCACATGCATCATTCCCTCTGTTGGCTCCCCCCCCATCTCCTCCAAAACTTACCTTCAATCCCTTCCATCTTCCATAAGTTCCATTTTTTTACCCTCCGTCACTCTTGATCATGTGCCTGATCCATCTCTCCTTGCAATCCAAATTGAACTCTCAGTGAATCTCTCTTTGCCTTACATAAGGGAAGAATTGAAGTCCTTATGTTCTAGAACAAAGGTTGTAGCTTTGGTTGTGGACGTTTTTGCAAATGGAGCTTTGGATTTTGCTAAGGAACTCAACCTCCTGTCTTACATATACCTCCCTCAATCAGCTATGTTGCTTTCTGGCTACTTTTACTCACCAAAGCTACATGAGATACTTTCTTCTGAGTCTAGAGACCCACAAGATCCTATTCAGATTCCTGGGTGTGTACCTGTTCCTTGGAGAGATCTCCCTCCTCCGTTTCGACATCAATCTAGCATAGGTTACAAGAGGTTTCTTGAACGTGCTAAACGACTTCATGTTCCTGATGGCATCTTTGTGAATACCTTCCATGAATTGGAATCAGGGGCTATTAGAGTTTTGCAGGAACAGGTCAAAGGGAAGCCCATGGTTTATCCTGTTGGACCCATAATTCAGAATGGGTCAGTCAGTCATGAAAACGGGTTGGAGTGTTTGACATGGTTGGATAAGCAAGAACCCAAGTCTGTTTTATACGTGTCGTTTGGAAGTGGTGGCACACTTTCCCAAGATCAATTCAATGAATTAGCCTTTGGGTTGGAATTGAGTGGTAAAAAATTTCTTTGGGTAGTGAGAGCCCCTAGCAGTGTGACCTGTTCTACTTACTTTGATGCTGCAATAGAGGACTCTCTAGGGTTCTTACCAGAGGGTTTTCTGGAGAGAACCAAGATGCATGGTTTGGTTGTCCCTTCTTGGGCCCCTCAGATTGAAGTGCTTGGTCACAGTTCAACTGGGGGGTTCCTTTCTCACTGTGGTTGGAATTCAGTGCTTGAAAGTGTTGTGCAGGGTGTGCCAGTGATAGCATGGCCTCTGTTTGCTGAGCAAGGGCTGAATGCTGCAATGCTAACTGATGGTCTAAAAGTGGCACTGAGACCAAAAGTTAATGACAGTGGGTTGGCTGAAAGAGAAGAAATTGCTAAGGTAGTGAGAGAGTTGATGGAAGGTAAAGAAGGCATGGAAATTCGAAGAAGAATGGACCATTTGAAGAATGCTGCCGCTATTGCCATAAAAGAAGATGGATCATCCACAAAGAATCTTTCAGTGGTGGCTGCCAATTTCAGAGGCTTTTAA 1395 0.4423 MEKPHIAVVPSAGFTHLVPILEFSKRLLHLYPEFHVTCIIPSVGSPPISSKTYLQSLPSSISSIFLPSVTLDHVPDPSLLAIQIELSVNLSLPYIREELKSLCSRTKVVALVVDVFANGALDFAKELNLLSYIYLPQSAMLLSGYFYSPKLHEILSSESRDPQDPIQIPGCVPVPWRDLPPPFRHQSSIGYKRFLERAKRLHVPDGIFVNTFHELESGAIRVLQEQVKGKPMVYPVGPIIQNGSVSHENGLECLTWLDKQEPKSVLYVSFGSGGTLSQDQFNELAFGLELSGKKFLWVVRAPSSVTCSTYFDAAIEDSLGFLPEGFLERTKMHGLVVPSWAPQIEVLGHSSTGGFLSHCGWNSVLESVVQGVPVIAWPLFAEQGLNAAMLTDGLKVALRPKVNDSGLAEREEIAKVVRELMEGKEGMEIRRRMDHLKNAAAIAIKEDGSSTKNLSVVAANFRGF* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0086 464 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 454 - -
Apr10g0086 464 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 464 - -
Apr10g0086 464 Gene3D Glycogen Phosphorylase B; 5 450 - -
Apr10g0086 464 Gene3D Glycogen Phosphorylase B; 246 445 - -
Apr10g0086 464 PANTHER GLYCOSYLTRANSFERASE 1 464 - -
Apr10g0086 464 CDD GT1_Gtf-like 4 441 IPR002213 GO:0008194
Apr10g0086 464 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 251 396 IPR002213 GO:0008194
Apr10g0086 464 ProSitePatterns UDP-glycosyltransferases signature. 340 383 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0086 Apr-Chr10 1959406 1961609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0086 4 463 Glycosyltransferase AT1G01420 45.905 2.49e-142 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0086 K08237 - gmx:100776196 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0086 10 1959406 1961609 Apr10g0080 10 1826858 1830132 PCT