Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0080 ATGGCCAAAACAACACATATAGCAGTAGTTTCAGTCCCAGCGTTTAGCCACCAAGCCTCCATTATTGAGTTCTGCAAGAAACTCGTTAATGTTCATCAGCACTTCCATGTGACTTGCATCTTCCCCACCATTGATGCTCCAATCCCTGCCACCACCACAATGCTTCAGTCTCTTCCATCCAACATTGACTACACTTTCCTAACTCCCGTGAACAATGAAGACCTTCCACAAGGTGTCCCCTCGGTGGTGCAAGCCCAACACGCAGTGTGTCAATCCATGCCATCCTTCCGCAATGCATTGAGGTCACTGCTTTCAACTACGCCACTCGCTGCTTTGGTTGCTGATGCATTTGCGAATGAAGCGTTGGAGATAGCAAAGGACTTCAACCTTTTATCTTATGTATACTTTTCTTCCTCTGCCATGACAATGTCACTGATGCTGCATTTGCCTACCTTAAACGACACCGTTATATTCAATTTCAAAGATCCCATAGTAGAGGCTATTCAGATTCCAGGTTGCATACCTATTCAAAGCCACAACCTCCCTAACGATTTTCGATCTAGTCTTGCTTATGAGCTAATTCTTCAACTTTGCAAGAGGTTATGTCTTGCTGACGGTTTTCTGGTTAATAGCTTCTTTGAAATGGAGCAAGATAATGTGAAAGCCCTGCAGAAATATTGCAGAGGCGACAATAACAATGCTTCAGTATATCTGGTTGGGCCTATTATACAAACCGGGCCGAATAGTAAGACAAATGGGCAAGAGTGTGTAAGGTGGTTGGAAAAGCAAAGGCCCAAGTCAATTTTGTATGTGTCCTTTGGAAGTGGAGGCACTCTCTCCCAACAACAGCTCAATGAGTTAGCCTTGGGATTGGAGTTGAGTGGCCAGAGATTCTTGTGGGTTTTGAGAGCACCTAATGATTCAGCAGATGGAGCATACCTTATTGCTGCAAACGATGACCCATTACAATTCTTACCGGATGGGTTTATAGAGAGAACAAAAGGGCAAGGTTTGGTTGTTCCTTCTTGGGCACCACAGACCCAAATCCTTAGCCACACTTCAACTGGTGGGTTTCTAACCCATTGTGGTTGGAATTCAACGCTTGAGAGCATTGTGTTGGGAGTGCCAATGGTGACTTGGCCATTGTTTGCTGAACAGCAAATGAATGCTGTTTTGCTAACCGACGGCCTCAAAGTGGCATTAAGGCCCAAATTTAATGAAAATGGTATAGCAGAAAAAGAGGAAATTGCTAAGGTGATTAATGGTCTAATGCTGGGTGAAGAAGGAAATGAGATTCGCCAAAGAATTGAAAAGCTCAAAGATGCAGCTGCTGATGCGTTAAAAAAAGATGGGTCATCTACAAGGGCGCTTTTCAAATTTGGCACTTGTATGGAGAACAATCTGAGCATCCATTAA 1416 0.4393 MAKTTHIAVVSVPAFSHQASIIEFCKKLVNVHQHFHVTCIFPTIDAPIPATTTMLQSLPSNIDYTFLTPVNNEDLPQGVPSVVQAQHAVCQSMPSFRNALRSLLSTTPLAALVADAFANEALEIAKDFNLLSYVYFSSSAMTMSLMLHLPTLNDTVIFNFKDPIVEAIQIPGCIPIQSHNLPNDFRSSLAYELILQLCKRLCLADGFLVNSFFEMEQDNVKALQKYCRGDNNNASVYLVGPIIQTGPNSKTNGQECVRWLEKQRPKSILYVSFGSGGTLSQQQLNELALGLELSGQRFLWVLRAPNDSADGAYLIAANDDPLQFLPDGFIERTKGQGLVVPSWAPQTQILSHTSTGGFLTHCGWNSTLESIVLGVPMVTWPLFAEQQMNAVLLTDGLKVALRPKFNENGIAEKEEIAKVINGLMLGEEGNEIRQRIEKLKDAAADALKKDGSSTRALFKFGTCMENNLSIH* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0080 471 Coils Coil 429 449 - -
Apr10g0080 471 Gene3D Glycogen Phosphorylase B; 253 448 - -
Apr10g0080 471 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 252 393 IPR002213 GO:0008194
Apr10g0080 471 ProSitePatterns UDP-glycosyltransferases signature. 343 386 IPR035595 -
Apr10g0080 471 Gene3D Glycogen Phosphorylase B; 6 454 - -
Apr10g0080 471 PANTHER GLYCOSYLTRANSFERASE 3 467 - -
Apr10g0080 471 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 460 - -
Apr10g0080 471 CDD GT1_Gtf-like 6 450 IPR002213 GO:0008194
Apr10g0080 471 PANTHER GLYCOSYLTRANSFERASE 3 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0080 Apr-Chr10 1826858 1830132 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0080 2 457 Glycosyltransferase AT1G01420 42.857 2.12e-131 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0080 K08237 - gmx:100810124 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0086 10 1959406 1961609 Apr10g0080 10 1826858 1830132 PCT