Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0083 ATGGAGAAGCAAACCCACATAGTGATTGTTCCTAGTCCTGGGTTCAGCCATCTCCTTTCAATCATTGAATTTTCCAAACGTTTAATCCACCACTCCAATGGCTTACACGTTACATGCCTCATTCCCACACTTGGGTCTCCCTCTGAGCCCTCCAAAACCATCCTTCAAACCCTCCCTTCAACCATTCACTCCACTTTTCTTCCTTCAATTCATTTCAATAACATACCCGAAGACACTCCAATAGCAGTCCAAGCTCAACTCACAGTGACTCACTCTCTTCCCTTTATCCGTGATGCGTTGGAGACCTTAAGTTCAAGCTCGAACCTTGTTGCTATTGCTGCTGATCTTTTTGCAAGTGATGCTCTTACTTGTGCAAAAGAGTTCAACATGTTGTCCTTTGTTTGCGTCCCGTCATCAGCTATGACACAGTCTTTTTGCTTGTATCTACCAAAGTTGGATCGAACAGTTTCTTCTGAGTTTAGATACCTAAAAGAACCCATTGAAATTCCGGGTTGTGTTCCCATCCATGGCAGAGATTTACCGAAACCCGTTCAGGATCGAACTAGCCAAGTCTATGAGTTGTTTCTTCAACGATGCAAACAACTCCATTTAGCTGATGGGGTCTTGGTAAACAGCTTCAGAGGTATTGAAGCAGGGCCTATAAGAGCATTGACAGAGGAAGGATATGGGTACCCCAGTGTTTATCCGATTGGACCAGTTATACAAAAAGGATCAGGTGATGTGAGAAATGGGTGTGAATGTTTAAGGTGGTTGGAGAATCAGGTAACCAATTCAGTTTTGTATATTAGCTTTGGAAGTGGAGGGACACTTCCACAAGACCAACTCAATGAGCTAGCTTTGGGGCTGGAAATAAGTGGTAAGAAATTCTTGTGGGTTTTGAGGGCACCGAGTAGATCTGCCAATTCTGCTTACCTTGATTCTGAAACTGATGATTCTTCACGATTCTTACCATGTGGGTTCATTGAAAGGACCAAAGAACAAGGTTTGGTGGTTCCCTCATGGGCACCTCAAGTTCAAGTCCTTAGTCATAGTGCAATTGGTGGGTTTTTAAGTCATTGTGGATGGAACTCTACCCTTGAGAGTGTCATGAATGGTGTACCTCTTATAGCATGGCCACTGTTCGCTGAGCAGGGAATGAATGCAGTTTTGTTAACTGAGGGCTTAAAAGTGGCACTAAGACCTAAAGCTGATGAAAATGGTCTGGTGGAAAGAGGGGAAGTTGCTAAGGTTGTGAGAAGACTACTAGAGGGTGAAGAAGGAAGGGAAATTGGTAAAAGAATGCAAAATTTGAAGGATACTGCTTTGAAAACTCTGCAAGAAGAAGGGTCACGTACCAAGACTTTAGTTCAGTTAGCAGTCTATTTGATGGGTAAATAG 1398 0.432 MEKQTHIVIVPSPGFSHLLSIIEFSKRLIHHSNGLHVTCLIPTLGSPSEPSKTILQTLPSTIHSTFLPSIHFNNIPEDTPIAVQAQLTVTHSLPFIRDALETLSSSSNLVAIAADLFASDALTCAKEFNMLSFVCVPSSAMTQSFCLYLPKLDRTVSSEFRYLKEPIEIPGCVPIHGRDLPKPVQDRTSQVYELFLQRCKQLHLADGVLVNSFRGIEAGPIRALTEEGYGYPSVYPIGPVIQKGSGDVRNGCECLRWLENQVTNSVLYISFGSGGTLPQDQLNELALGLEISGKKFLWVLRAPSRSANSAYLDSETDDSSRFLPCGFIERTKEQGLVVPSWAPQVQVLSHSAIGGFLSHCGWNSTLESVMNGVPLIAWPLFAEQGMNAVLLTEGLKVALRPKADENGLVERGEVAKVVRRLLEGEEGREIGKRMQNLKDTALKTLQEEGSRTKTLVQLAVYLMGK* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0083 465 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 259 391 IPR002213 GO:0008194
Apr10g0083 465 Gene3D Glycogen Phosphorylase B; 247 446 - -
Apr10g0083 465 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 462 - -
Apr10g0083 465 Gene3D Glycogen Phosphorylase B; 6 450 - -
Apr10g0083 465 PANTHER GLYCOSYLTRANSFERASE 1 462 - -
Apr10g0083 465 ProSitePatterns UDP-glycosyltransferases signature. 341 384 IPR035595 -
Apr10g0083 465 CDD GT1_Gtf-like 6 441 IPR002213 GO:0008194
Apr10g0083 465 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0083 Apr-Chr10 1870921 1872327 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0083 6 460 Glycosyltransferase AT1G01420 48.366 4.36e-153 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0083 K08237 - gmx:100775732 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0083 10 1870921 1872327 Apr10g0083 10 1870921 1872327 ECH
Apr10g0128 10 3368269 3369834 Apr10g0083 10 1870921 1872327 PCT
Apr10g0083 10 1870921 1872327 Apr10g0077 10 1762573 1764038 PCT