Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr10g0077 ATGGCCAAAACAACCCATATAGCTGTAATTTCAATCCCTGCATTCAGCCACCAAGCCTCTATTGTTGAGTTCTGCAAGAGACTCCTTCATCTCTATCAGCACTTCCATGTGACTTGCATCTTCCCAACTATTAATGCACCTGTTCCTGCCACACTCACTTTGCTTCAATCTCTTCCTTCCAACATAGACTACACATTCCTCCCACCTGTGAACAAACAAGACCTACCTCAAGATGTTCCTCCAGCAGTGCAAATACAACTTGCAGTGTCTCAGTCCATGCCATCATTCCGCCACGCGTTGCGGTCACTCTGTTCAACCTCGCCTCTAACTGCTTTAGTTGCTGATCCTTTTGCAAACGAGGCACTAGAAATAGCAAAAGAGTTCCACCTCTTCTCTTACATATACTTCCCTACTTCTGCCATGACGCTCTCACTGTTCTTGCATTTGCAAACTTTACATGAACAAGTTTCATGTGAATACAAAGATCATAAAGAAGCCATTCAAATTCCGGGTTGCATACCAATTCAAGGCCATGATCTCCCGGAGCATTTTCAAGATCGATCTAGTCTTGCTTATGAGCTTATTCTTCAACGCTGCAAGAGATTCCCACTTGCTGATGGTTTCTTGGTTAATAGCTTCTCTGAAATTGAAGACGGTACAGTAAATGTTTTGCAAGAACAGAGCGAAGGTAGCAGCAAAATCAATGCCCCTGTTTATTTGGTTGGACCAATTGTACAAACTGGGCCAAGTAGTGAATCAAATGAGTCAGAGTGTGTGAAATGGTTGGAAAAGCAAAGGCCCAACTCTGTTTTGTATGTGTCCTTTGGAAGTGGGGGCACTCTCTCTCAACAACAGCTTAATGAGCTAGCTTTGGGATTGGAGTTGAGCGGTCAGAAATTCTTGTGGGTTTTGAGAGCACCGAGTGATTCAGTGAATGCGGCTTACCTTGGTGTTGCAAATGATGACCCTTTACAGTTCTTACCAGATGGATTCTTAGAGAGAACAGAAGAACAAGGGTTGGTTGTTCCTTCTTGGGCACCGCAGACCCAAATCCTTAGCCACACTTCAACTGGTGGGTTTCTAACCCATTGTGGTTGGAATTCAACGCTTGAGAGCATTGTGTTGGGAGTGCCAATGATGACTTGGCCACTGTTTGCTGAACAGAAAATGAATGCTGTTTTGCTAACCGACGGCCTCAAAGTGGCATTAAGGCCCAAATTTAATAAAAATTGTATAGCAAACAGAGAGGAAATTGCTGAGGTGATTAAAGGTCTAATGCTGGCTGAAGAAGGAAATTGGATTCGCCAAAGAATTGAGAAGCTAAAAAATGCAGCTGCTGATGCATTTAAAGAAGATGGGTCTTCCACAAGGGCACTTTCCCAATTTGCCTCTCAGATGGAAAATTTTCAGGGCCTGCCTTAA 1422 0.4367 MAKTTHIAVISIPAFSHQASIVEFCKRLLHLYQHFHVTCIFPTINAPVPATLTLLQSLPSNIDYTFLPPVNKQDLPQDVPPAVQIQLAVSQSMPSFRHALRSLCSTSPLTALVADPFANEALEIAKEFHLFSYIYFPTSAMTLSLFLHLQTLHEQVSCEYKDHKEAIQIPGCIPIQGHDLPEHFQDRSSLAYELILQRCKRFPLADGFLVNSFSEIEDGTVNVLQEQSEGSSKINAPVYLVGPIVQTGPSSESNESECVKWLEKQRPNSVLYVSFGSGGTLSQQQLNELALGLELSGQKFLWVLRAPSDSVNAAYLGVANDDPLQFLPDGFLERTEEQGLVVPSWAPQTQILSHTSTGGFLTHCGWNSTLESIVLGVPMMTWPLFAEQKMNAVLLTDGLKVALRPKFNKNCIANREEIAEVIKGLMLAEEGNWIRQRIEKLKNAAADAFKEDGSSTRALSQFASQMENFQGLP* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr10g0077 473 Gene3D Glycogen Phosphorylase B; 6 456 - -
Apr10g0077 473 CDD GT1_Gtf-like 6 448 IPR002213 GO:0008194
Apr10g0077 473 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 268 395 IPR002213 GO:0008194
Apr10g0077 473 PANTHER GLYCOSYLTRANSFERASE 3 469 - -
Apr10g0077 473 PANTHER GLYCOSYLTRANSFERASE 3 469 - -
Apr10g0077 473 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 472 - -
Apr10g0077 473 ProSitePatterns UDP-glycosyltransferases signature. 345 388 IPR035595 -
Apr10g0077 473 Gene3D Glycogen Phosphorylase B; 255 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr10g0077 Apr-Chr10 1762573 1764038 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr10g0077 2 470 Glycosyltransferase AT1G01420 45.666 1.29e-146 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr10g0077 K08237 - gmx:100776809 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr10g0083 10 1870921 1872327 Apr10g0077 10 1762573 1764038 PCT