Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g3007 ATGGCTGAGTTTGGAGGAAGATGGTTGAAGGGTGTTGTGGGAATGGGATCCATATGGATGTTGTTGCTGTGTTTTGCATCTGTTATGGTGTTTGTTTCTGGTGAAAGGATGATGAAGATGGAAGTTCCATGGTTCAATGTTACTCAACAAGATCAGAGTTTCCTGAACATAGCTGTGAATTTCTTATGGCAATCTAATGAATCAGGTTATCAACATGTGTGGCCGGATATGGAATTTGGGTGGAGAATTGTGCTTGGTAGCTTTATTGGATTTTGTGGAGCTGCATTTGGAAGCGTAGGTGGTGTTGGTGGAGGTGGCATATTTGTTCCCATGCTTAGTCTCATCATTGGTTTTGATCCAAAATCATCAACTGCTATCTCAAAATGTATGATCATGGGAGCAGCTTTGTCAACTGTTTACTACAACCTTAGACTAAGGCATCCAACATTGGATATGCCTATAATTGACTATGATTTGGCACTTCTCATTCAACCAATGCTGATGCTTGGAATCAGCATTGGAGTGACCTTCAATGTTCTTTTCCCTGATTGGATGGTCACTATACTGCTTATTGTTATCTTTGTAGTGACATCAACCAAGGCATTCTTTAAGGGTGTGGAAACTTGGAAGAAGGAAACCATAATGAAAAAGGAAGCTGCTCAGCGACAAGAGACAAATGGTTCTGGTGCTGAAGCAGAGTACAAACCTCTTCCTGCCGGGCCAAATGGTGGCGCAGCAAAGAAGGAGGAACACCAGGTGACTATTATTGAAAATATATACTGGAAGGAGTTGGGATTACTTCTGTTTGTTTGGTTTTCATTTCTTGCACTACAGATTATCAAGGAATACTATACAACTACTTGTTCAACAGCATACTGGGTGCTGAACATTCTACAGATTCCGGTGTCGGTTGGGGTAACTGCTTATGAGGCAAGTGGCTTATTTAGCGGACGTAGAGTAATCTCTTCGACCGGAGACGAAGGGAAAAATTTCACTGTTCTTCAGCTGTTTATATATTGCGTCTTCGGTTTACTGGCTGGAGTAGTTGGCGGCTTGCTGGGACTTGGAGGAGGATTTGTTATGGGACCACTGTTTTTGGAGTTGGGAGTCCCACCTCAGGTGTCAAGCGCCACTGCCACCTTCGCCATGATCTTCTCCTCATCCATGTCTGTTATAGAATACTACCTGTTGAAGCGTTTCCCGGTTCCTTATGCTGCATATTTGACTCTGGTGGCCACTATAGCTGCCTTGGTTGGACAGCATATTGTGAGGAGATTGATCATCCTATTTGGAAGAGCTTCCCTTATCATCTTCATTCTTGCTGGCACAATATTTGTTAGTGCAATCTCATTAGGTGGAGTTGGAATATCAAACATGGTATACAAGATTGAGAATCATGAATACATGGGATTTGAGAATCTGTGCAAATATGGATCATAA 1440 0.4243 MAEFGGRWLKGVVGMGSIWMLLLCFASVMVFVSGERMMKMEVPWFNVTQQDQSFLNIAVNFLWQSNESGYQHVWPDMEFGWRIVLGSFIGFCGAAFGSVGGVGGGGIFVPMLSLIIGFDPKSSTAISKCMIMGAALSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVTFNVLFPDWMVTILLIVIFVVTSTKAFFKGVETWKKETIMKKEAAQRQETNGSGAEAEYKPLPAGPNGGAAKKEEHQVTIIENIYWKELGLLLFVWFSFLALQIIKEYYTTTCSTAYWVLNILQIPVSVGVTAYEASGLFSGRRVISSTGDEGKNFTVLQLFIYCVFGLLAGVVGGLLGLGGGFVMGPLFLELGVPPQVSSATATFAMIFSSSMSVIEYYLLKRFPVPYAAYLTLVATIAALVGQHIVRRLIILFGRASLIIFILAGTIFVSAISLGGVGISNMVYKIENHEYMGFENLCKYGS* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g3007 479 Pfam Sulfite exporter TauE/SafE 341 442 IPR002781 GO:0016021
Amo20g3007 479 Pfam Sulfite exporter TauE/SafE 88 206 IPR002781 GO:0016021
Amo20g3007 479 PANTHER CEREBLON 15 477 - -
Amo20g3007 479 MobiDBLite consensus disorder prediction 220 245 - -
Amo20g3007 479 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 15 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g3007 Amo-Chr20 132543722 132548268 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g3007 - - gmx:100810784 724.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g3007 20 132543722 132548268 Amo20g3007 20 132543722 132548268 ECH
Amo10g2436 10 85535877 85539631 Amo20g3007 20 132543722 132548268 hybridization
Amo06g3117 06 98267817 98273271 Amo20g3007 20 132543722 132548268 PCT
Amo20g3007 20 132543722 132548268 Amo06g3117 06 98267817 98273271 PCT