Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g3117 ATGGGTTCGATTCGGACGATGGTGATGATAATGTTATACTTTTCATCGGTTTTCATGTTAGTTTCGGGAGATAGAATTTTCATGAAGCTGGAAGGGTCAAGATTCAATGATACAAAGGATTATGCTTATGAACAGAATTTAGTTACCAATATTGTAGAGTTCTTATGGCAACCGGGAGAATCAGGTTATCAACATGTCTGGCCGGATATGAAACTTGGGTGGCAAATAGTTGTGGGCACAATAATAGGTTTCTGTGGAGCAGCATTTGGAAGTGTAGGAGGTGTTGGTGGTGGTGGCATATACGTTCCTATGCTTACTCTTATTATTGGGTTTGATCAGAAATCATCCACAGCTATTTCAAAATGTATGATAATGGGTGCAGCATTGTCAAGTGTTCACTATAACCTTAAACTGAGGCATCCTACAATGAATGCTCCTATGATTGACTATGATTTGGCACTTCTCATTCAACCAATGCTCATGCTTGGCATAAGCATTGGAGTGATTTTTAATGTTATATTTCCTGAATGGATAGTCACCATTTTGCTTCTTGTTCTTTTCTTAGGAACATCAACAAAAGCATTCCTTAAGGGTGTTGAAACATGGAAAAAGGAAACAATAATGAAAAAGGAAGCTATGAGGAGACTAGAGTCAAACGGCGCTGCGTCTGAAGTAGAATACAGACCAATTCCTACTGGCCCTGATGCCATTAAACACATCGAGAAGCATGAGGTGACTCTTATTGAAAACATTCCAGTTGCATTAGGGGTGTGTGTATATGAGGCGGTTTCATTGTATAAGGGAAGGAGAACACTTTCATCGATAGGAGAAAGAGGAACAAATTTCACTGTGTTCCAACTAATCACATATTGTTTCTTTGGAGTGGTTGCTGGAGTGGTTGGTGGCTTGCTGGGTCTTGGTGGAGGATTCATAATGGGACCACTCTTTCTTGAGTTGGGGGTCCCACCTCAGGTTTCAAGTGCCACTGCCACATTTGCCATGACCTTTTCCTCTTCTATGTCTGTCGTACAGTACTACCTCTTGAAACGGTTTCCGGTTCCTTATGGTTAG 1071 0.4099 MGSIRTMVMIMLYFSSVFMLVSGDRIFMKLEGSRFNDTKDYAYEQNLVTNIVEFLWQPGESGYQHVWPDMKLGWQIVVGTIIGFCGAAFGSVGGVGGGGIYVPMLTLIIGFDQKSSTAISKCMIMGAALSSVHYNLKLRHPTMNAPMIDYDLALLIQPMLMLGISIGVIFNVIFPEWIVTILLLVLFLGTSTKAFLKGVETWKKETIMKKEAMRRLESNGAASEVEYRPIPTGPDAIKHIEKHEVTLIENIPVALGVCVYEAVSLYKGRRTLSSIGERGTNFTVFQLITYCFFGVVAGVVGGLLGLGGGFIMGPLFLELGVPPQVSSATATFAMTFSSSMSVVQYYLLKRFPVPYG* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g3117 356 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 6 251 - -
Amo06g3117 356 PANTHER SULFITE EXPORTER TAUE/SAFE FAMILY PROTEIN 3 249 355 - -
Amo06g3117 356 Pfam Sulfite exporter TauE/SafE 4 189 IPR002781 GO:0016021
Amo06g3117 356 Pfam Sulfite exporter TauE/SafE 292 346 IPR002781 GO:0016021
Amo06g3117 356 PANTHER CEREBLON 6 251 - -
Amo06g3117 356 PANTHER CEREBLON 249 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g3117 Amo-Chr6 98267817 98273271 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g3117 - - aip:107647538 471.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g3117 06 98267817 98273271 Amo10g2436 10 85535877 85539631 PCT
Amo06g3117 06 98267817 98273271 Amo20g3007 20 132543722 132548268 PCT
Amo10g2436 10 85535877 85539631 Amo06g3117 06 98267817 98273271 PCT
Amo20g3007 20 132543722 132548268 Amo06g3117 06 98267817 98273271 PCT