Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2923 ATGGGTAGGAGAGTGTTATGCTTATGCATGTTTCTTGGGGCATTATTTATGTTATTCAATGCCCAAAATGCATTAGTTAGTTGTGCTTTGACTTCTCAATTGCAAGAAGAAATAACAAGAATCAACGAAGAAGGGCCTTATATAGGTTTGGTCATACCAAATTCTTTTGAACTCAATCCTCTTCTTCAAAATCCAGCCTACACTCCCAGTGAAAATATTATTGACTTTGCAGGAAGGAGATTCCGCTTTGGATCCATTGGCGATAAGCCTGTTATATTGGTCATGACTGGATTGAGTGTGATAAATGCAGCAATTACTACACAGCTTCTTTTAAGCATTTTCAACATAGAAGGAGTGGTGCATTACGGCATTGCTGGAAATGCAAACCCATCCTTGAATATTGGAGATGTTGCAATTCCTCATTTTTGGGCTCATTTGACACTTTGGAGCTGGCAGAGATATGGAGAAGGGCCTAGTAATACATTACCCTTAGAACAAAATGGAGACTACACAAGAAACGTAGGGTACCTAAAATTTGGAGATTTCATGTCAAATGTAAGTTGGGGAGATTCATTTGATAACCTTCTAAACAGAATATGGTACCAACCAGAAGAGGTTTTTCCAGTTGATGGAATTCCAGAACAGAGGCAACACGCTCTCTGGGTTCCTGTTGATTACCATTACTACCAAATTGCTAGCAGGTTGAAGAAGTTGAAACTTGATGAATGCATAAACTCAACAACATGCTTGTCCACAACACCAAAAGTGGAATTGGTTGAAAGAGGAGCAAGTGCAAGCATATACATAGACAATGCAGCATATAGAAGCTTCATCTACAACAAGTTCCATGTCACCCCGGTGGAGATGGAAAGTGCATCGGTGGCACTCATTTGCCTCCAACAAAGGGTCCCTTTCATTGTCATTAGGGCTCTCTCCGACCTGGCCGGCGGCGGCTCCTCCGACTCCAATGAGGCCGACACATTTGCGCCGCTTGCTGCCACCAATTCGGTTAAGGTCGTTATTGAGTTTATCAAGCTTTTGCCATCAAAAACCCCTAAGTGGTCGCCCATGTAA 1074 0.4218 MGRRVLCLCMFLGALFMLFNAQNALVSCALTSQLQEEITRINEEGPYIGLVIPNSFELNPLLQNPAYTPSENIIDFAGRRFRFGSIGDKPVILVMTGLSVINAAITTQLLLSIFNIEGVVHYGIAGNANPSLNIGDVAIPHFWAHLTLWSWQRYGEGPSNTLPLEQNGDYTRNVGYLKFGDFMSNVSWGDSFDNLLNRIWYQPEEVFPVDGIPEQRQHALWVPVDYHYYQIASRLKKLKLDECINSTTCLSTTPKVELVERGASASIYIDNAAYRSFIYNKFHVTPVEMESASVALICLQQRVPFIVIRALSDLAGGGSSDSNEADTFAPLAATNSVKVVIEFIKLLPSKTPKWSPM* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2923 357 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Amo20g2923 357 CDD MTAN 48 343 - -
Amo20g2923 357 Pfam Phosphorylase superfamily 48 345 IPR000845 GO:0003824|GO:0009116
Amo20g2923 357 Gene3D Nucleoside phosphorylase domain 47 346 IPR035994 GO:0003824|GO:0009116
Amo20g2923 357 SUPERFAMILY Purine and uridine phosphorylases 35 349 IPR035994 GO:0003824|GO:0009116
Amo20g2923 357 PANTHER BARK STORAGE-LIKE PROTEIN 8 350 - -
Amo20g2923 357 PANTHER PURINE NUCLEOSIDE PHOSPHORYLASE 8 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2923 Amo-Chr20 130997641 131001500 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2923 - - gsj:114415138 535.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g2923 20 130997641 131001500 Amo20g2923 20 130997641 131001500 ECH
Amo10g2424 10 84843500 84847632 Amo20g2923 20 130997641 131001500 hybridization