Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g2424 ATGGTACTTTTGTTGGCGTATTTAAAAATTGGAACAGTTTTGCGGCATGACTCATCATCGGCCTATATAAACAGGTATTTGGGATGTTCATTTCTGAGGTCCTGCACTTGTTATATTTTGAGTGTGGGAAGAACAATAAACATGGGTGGCAGAGTGTTGTGCAAAATGTTGGTTGCAGCATTGTTTATGTTATTCAGTGCCCAAAATGCATTAGTAAGTTGTGCTTTGAGTTCTGAATTGCAAGAACAAATCAATGCAATCAACGAACAAGGGCCATACATAGGTTTGGTCATACCAAATTCCTTTGAACTCGATCCTCTTCTTAGCAATTCAGACTACATTGCTAGTGGTTATGTCCTAGACGTTTCAGGCAGGAGATTTCGCTTTGGAGCCATTGGTGACAAGCCTGTTATATTGATAAATGCAGGAATAACTACTCAGCTTCTTTTGAGCCTTTTCAACATAGAAGGAGTGGTGCATTATGGCATAGCTGGAAATGCAAATGAACAACTTCATATTGGAGATGTTGCTATTTCTCATTATTGGGGTCATCTWGGCCTTTGGAGTTGGCAGAGGTATGGGCTAGGGCCGGAGAATGAACTACCCTTAGAACCAAACGGAGACTACACAAGAAAATATGGAKACTTAAAATTTGCAGATTACACATCAAATGTTACTGCGGATAGTTCATATGACAACCTTCTCAACAATATTTTTTACCAACCAGAAGAGATTTTCCCCATTGATGGCACTCCTGAACAAAGGCAACATGCTTTTTGGGTTCAGGTTGATACCACTTACTACAACACTGCTAGCAGACTCAAGAACATGAAGCTTGAGAAGTGTCTAAACTCAACAAAATGCTTATCACATACACCAAAATTGAAATTTGTGTCAAAAGGAGCYAGTGCAAGCATCTACCTAGACAATGCAGCATATAGAGGCTTCATTCGTGAACAATTTGAGGTGACACAAGTGGACATGGAAAGTGCATCCGTCGCACTTATATGCCGTCAACAAAATGTTCCCTTTATTGTCATTAGGGCTCTCTCCAACTTGCCCGGCGGCAGCTCAGAAGATTCCAACGAGGCTGACACCTTTGCGCCCCTCGCCGCCACCAATTCGGTWAAAGTGGTTGTTGAGTTTGTCAAGCTCTTGCCATCATCATTATCAAGCTCTAAGATTAAGAGGTCACCCATGTAA 1203 0.4131 MVLLLAYLKIGTVLRHDSSSAYINRYLGCSFLRSCTCYILSVGRTINMGGRVLCKMLVAALFMLFSAQNALVSCALSSELQEQINAINEQGPYIGLVIPNSFELDPLLSNSDYIASGYVLDVSGRRFRFGAIGDKPVILINAGITTQLLLSLFNIEGVVHYGIAGNANEQLHIGDVAISHYWGHLGLWSWQRYGLGPENELPLEPNGDYTRKYGXLKFADYTSNVTADSSYDNLLNNIFYQPEEIFPIDGTPEQRQHAFWVQVDTTYYNTASRLKNMKLEKCLNSTKCLSHTPKLKFVSKGASASIYLDNAAYRGFIREQFEVTQVDMESASVALICRQQNVPFIVIRALSNLPGGSSEDSNEADTFAPLAATNSVKVVVEFVKLLPSSLSSSKIKRSPM* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g2424 400 Pfam Phosphorylase superfamily 94 383 IPR000845 GO:0003824|GO:0009116
Amo10g2424 400 Gene3D Nucleoside phosphorylase domain 71 388 IPR035994 GO:0003824|GO:0009116
Amo10g2424 400 PANTHER PURINE NUCLEOSIDE PHOSPHORYLASE 55 390 - -
Amo10g2424 400 PANTHER BARK STORAGE-LIKE PROTEIN 55 390 - -
Amo10g2424 400 SUPERFAMILY Purine and uridine phosphorylases 79 389 IPR035994 GO:0003824|GO:0009116
Amo10g2424 400 CDD MTAN 94 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g2424 Amo-Chr10 84843500 84847632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g2424 - - gsj:114415138 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g2424 10 84843500 84847632 Amo20g2923 20 130997641 131001500 hybridization