Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g2404 TTAAATAAAGAGCCACCAAATCTGACTTTTAGGAAGAAAGATAAAGGTGGAATCAACCTCACTTCAACGGTTACCAACACACATTTGGATCTTGACACTGTGAAGGCTATATGTAGTGAGTACAAAATTCACAATGCAGATATTACTCTCAGATATGATGCTACTGCCGATGACCTTATAGATGTTATCGAGGGAAGTAGAGTATACATGCCTTGCATCTATGTTGTGAACAAGATTGATCAGATCACACTTGAGGAATTAGAGATATTGGATAAGCTACCTCATTACTGCCCAATCAGTGCTCTGGTCTGGGGTTCAAGTGCGAAGCACAAGCCTCAAAGAGTTGGCAAGGAGCATGAACTTGAAGATGAAGACGTGGTTCAGATTATCAAGAAGGGGCATGAGTTGGAACTGAGACTTCCAAMCAGTGATTGA 435 0.4092 LNKEPPNLTFRKKDKGGINLTSTVTNTHLDLDTVKAICSEYKIHNADITLRYDATADDLIDVIEGSRVYMPCIYVVNKIDQITLEELEILDKLPHYCPISALVWGSSAKHKPQRVGKEHELEDEDVVQIIKKGHELELRLPXSD* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g2404 144 PANTHER - 1 101 IPR045001 GO:0003924|GO:0005525
Amo20g2404 144 PANTHER - 101 132 IPR045001 GO:0003924|GO:0005525
Amo20g2404 144 Pfam C-terminal region of MMR_HSR1 domain 15 101 IPR031662 -
Amo20g2404 144 Gene3D - 1 68 - -
Amo20g2404 144 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 102 IPR027417 -
Amo20g2404 144 SUPERFAMILY TGS-like 99 131 IPR012676 -
Amo20g2404 144 PANTHER DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 1 1 101 - -
Amo20g2404 144 PANTHER DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 1 101 132 - -
Amo20g2404 144 Pfam TGS domain 100 131 IPR004095 -
Amo20g2404 144 Gene3D - 74 132 IPR012675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g2404 Amo-Chr20 112229581 112230819 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g2404 K06944 - qsu:112007327 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo10g1896 10 68217078 68222662 Amo20g2404 20 112229581 112230819 hybridization