Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1619 ATGCCTAACGTGGGAAGGAACGATAGTGAACATGAAAATCACAAGGATGGTAAAGGCAACGTTAAAGCACCGGAAACCGCGCACCAGATTAGTAGCGATTCATGGTTTCAAGTGGCTTTTGTCCTAACCACCGGAATCAACAGCGCTTATGTGCTGGGATATTCCGGCACCATCATGGTGCCGCTTGGTTGGGTTGGTGGCGTGGTTGGTCTAATCCTGGCCACCATGATTTCGCTCTATGCAAATGCTCTTGTTGCTATGCTCCATGAGTATGGGGGGAGAAGGCACATCAGATGTAGAGATCTTGCTGGATTCATATACGGAAGATGGGCGTATACTCTTACATGGGCTCTACAATACGTCAATCTTTTCATGATCAATACTGGCTATATCATTTTGGCCGGTTCAGCCTTGAAAGCTACTTATCTTCTATTTTGGGATGATCACACAATGAAACTTCCATATTTTATTGCCATAGCTGGCTTTGTGTGTGCAATGTTTGCCTTTGGAATCCCTACTCTTTCAGCTCTTGGAGTTTGGCTGGGTTTTTCAACTCTCTTGAGTCTAGCTTATATTGTTATAGCATTTGTGCTGTCCCTTAAAGATGGATTGAATGCACCACCTAGAGATTTCAGTATTCCGGGCGATGGCGCCGGTAAAATATTTTCGATCATCGGAGCAAGCGCTAATCTCGTGTTCGCATATAACACTGGCATGCTTCCCGAAATACAGGCAACAATTAAGCAGCCAGTTGTGACGAACATGATGAAAGCCCTGTATTTTCAGTTCACAGTTGGTGTTCTTCCATTGTACCTGGTTACGTTTACAGGTTACTGGGCTTATGGAAATTCCACATCAGCATATTTGCTGAACAATGTGAATGGTCCTGTTTGGGTTAAAGCTGTAGCTAACATTACAGCTTTTCTTCAATCAGTCATTGCATTGCATATATTTGCTAGTCCTATGTATGAGTATGCGGACACCAAATATGGGATCACCGGAAGTGCCCTACAAATTAAGAACTTAACATTCAGGATTTTACTAAGAGGTGGCTACCTCACCTTCAATACATTTGTATCTGCTCTGCTACCATTTCTTGGAGATTTCATGAGCCTCACAGGTGCAATAAGCACATTCCCACTCACATTTATTCTTGCAAACCATATGTACCTAACGGCAAAGAAGGACAAACAATCATCCATGCAACAGCTTTGGCACTGGCTCAACATTGTTTTCTTTAGCATCATGTCTCTTGTAGCAACAGTTTCGGCCGTACGGCTTATCTCCGTAGACTCCAAAACATACCATCTTTTTGCTGATTTATGA 1326 0.4306 MPNVGRNDSEHENHKDGKGNVKAPETAHQISSDSWFQVAFVLTTGINSAYVLGYSGTIMVPLGWVGGVVGLILATMISLYANALVAMLHEYGGRRHIRCRDLAGFIYGRWAYTLTWALQYVNLFMINTGYIILAGSALKATYLLFWDDHTMKLPYFIAIAGFVCAMFAFGIPTLSALGVWLGFSTLLSLAYIVIAFVLSLKDGLNAPPRDFSIPGDGAGKIFSIIGASANLVFAYNTGMLPEIQATIKQPVVTNMMKALYFQFTVGVLPLYLVTFTGYWAYGNSTSAYLLNNVNGPVWVKAVANITAFLQSVIALHIFASPMYEYADTKYGITGSALQIKNLTFRILLRGGYLTFNTFVSALLPFLGDFMSLTGAISTFPLTFILANHMYLTAKKDKQSSMQQLWHWLNIVFFSIMSLVATVSAVRLISVDSKTYHLFADL* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1619 441 MobiDBLite consensus disorder prediction 7 22 - -
Amo20g1619 441 Pfam Transmembrane amino acid transporter protein 33 424 IPR013057 -
Amo20g1619 441 PANTHER OS05G0424000 PROTEIN-RELATED 14 436 - -
Amo20g1619 441 MobiDBLite consensus disorder prediction 1 23 - -
Amo20g1619 441 PANTHER PROLINE TRANSPORTER 1 14 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1619 Amo-Chr20 44897250 44899859 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g1619 59 441 Organic Solute Cotransporters AT2G39890 74.413 0.0 601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1619 - - gmx:100778997 702.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1619 20 44897250 44899859 Amo10g1132 10 23755133 23759216 hybridization
Amo20g1619 20 44897250 44899859 Amo17g0377 17 6645232 6648662 PCT
Amo17g0377 17 6645232 6648662 Amo20g1619 20 44897250 44899859 PCT