Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo17g0377 ATGGTTCCTCTTGGTTGGATAGGTGGTGTGCTGGGTTTGATTCTTGCAACTGCAATTTCCCTATACGCCAATGCTCTTCTTGCTAAGCTCCATGAATTTGGTGGAACAAGGCATATTAGATACAGAGATTTAGCTGGCTTTATCTATGGTAGAAAAGCATATTCTCTCACATGGGCCCTGCAGTATATCAACCTTTTCATGATAAATGCTGGCTATATCATCTTGGCTGGTTCTGCCTTAAAGGCTGTGTATGCTCTATTTTGGGATGATGGTCAGATGAAGCTTCCATATTGTATTGCCATAGCTGGATTAGTGTGTGCAATGTTTGCCATTTGTATTCCACATCTTTCAGCACTTGGAGTTTGGCTGGGGTTTTCAACACTCTTCAGCTTAGTATATATTGTCATTGCACTTGTCCTGTCCCTTAAAGATGGAATAAAATCACCACCTCGAGATTACAGTATTCCAGGGTCATCAACAAGTAAAATATTTACTACAATTGGAGCATCAGCTAATCTTGTTTTTGCATATAATACAGGCATGCTTCCTGAAATCCAGGCAACAATCAGGCAGCCAGTTGTGAAGAACATGATGAAAGCTCTATACTTTCAATTCACTGTTGGAGTCCTCCCATTGTATCTGGTTACTTTTGCAGGGTACTGGGCTTATGGATCTTCAACAGAAACCTATTTGCTGAATAATGTTAATGGTCCAGTCTGGGTGAAAGCCATGGCCAATATCACTGCCTTTCTTCAATCAATTATAGCATTGCACATATTTGCAAGTCCAATGTATGAGTATTTGGATACAAAGCGTGGGATCAAAGGAAGTGCATTGGCTTTTAAGAACTTGTCATTTAGAGTGATGGTAAGAGGTGGCTACTTGGCTATTAACACATTTATGTCAGCACTATTGCCATTCCTTGGAGATTTCATGAGTATCACAGGGGCTATCAGCACATTTCCCCTTACATTTATCCTTGCAAACCATATGTACTTRGTGGCAAATAAGAACAAATTAACATCCATACAAAAGCTATGGCATTGGCTCAACATTTGTTTATTTGGATTCATGTCTATTGCAGCAACAGTTGCAGCCCTACGGCTTATTGCTGTTGACTCCAAAACGTACCATTTTTTTGCTGATTTATAA 1152 0.3976 MVPLGWIGGVLGLILATAISLYANALLAKLHEFGGTRHIRYRDLAGFIYGRKAYSLTWALQYINLFMINAGYIILAGSALKAVYALFWDDGQMKLPYCIAIAGLVCAMFAICIPHLSALGVWLGFSTLFSLVYIVIALVLSLKDGIKSPPRDYSIPGSSTSKIFTTIGASANLVFAYNTGMLPEIQATIRQPVVKNMMKALYFQFTVGVLPLYLVTFAGYWAYGSSTETYLLNNVNGPVWVKAMANITAFLQSIIALHIFASPMYEYLDTKRGIKGSALAFKNLSFRVMVRGGYLAINTFMSALLPFLGDFMSITGAISTFPLTFILANHMYLVANKNKLTSIQKLWHWLNICLFGFMSIAATVAALRLIAVDSKTYHFFADL* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo17g0377 383 Pfam Transmembrane amino acid transporter protein 1 367 IPR013057 -
Amo17g0377 383 PANTHER PROLINE TRANSPORTER 1 1 378 - -
Amo17g0377 383 PANTHER OS05G0424000 PROTEIN-RELATED 1 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo17g0377 Amo-Chr17 6645232 6648662 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo17g0377 1 383 Organic Solute Cotransporters AT2G39890 76.762 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo17g0377 - - gmx:100500168 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo17g0377 17 6645232 6648662 Amo17g0377 17 6645232 6648662 ECH
Amo20g1619 20 44897250 44899859 Amo17g0377 17 6645232 6648662 PCT
Amo10g1132 10 23755133 23759216 Amo17g0377 17 6645232 6648662 PCT
Amo17g0377 17 6645232 6648662 Amo20g1619 20 44897250 44899859 PCT
Amo17g0377 17 6645232 6648662 Amo10g1132 10 23755133 23759216 PCT