Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1293 ATGCGCGCCGTAGCTGCTCGCTTTTCTAACTATTTATGTAAGAGGAGACCTGTGATCAGTGTTCAATCTCGTAATTTTTCATCATATAGTGGCAAAGATGAGCTATCTATTGAACAAGAAGCTGAGAGAAAAGTTGGATGGCTATTAAAGACGATATTTTTCGCCACAGCTGCAGCCGCAGGATACCAGTTCTTTCCTTATATGGGAGAAAACTTGATGCAGCAGTCAGTTTCACTTTTGCGCGTCAGGGATCCCTTGTATAAAAGGATGGGAGCTTCTAGGTTGACTCGATTCGCAATAGATGATGAAAGAAGGATGAAGATACTCRAGATGGGTGGAGCTGAAGAGCTCTTAAATATGTTAAGCACGGCTAAGGATGACCGCACACGAAAAGCAGCTTTGGAGGCTCTTGCTGCACTGTCACAATCAGATAAAGTTCTTGCGTCCCTGCACAATGCTGGGGCCATTTCAATCATTAGGTCTGCACCAAATTCACTTGAGGATGCAGAAGTTGAGAAATTCAAGTTGAGCTTGTTGAAGAGGTTCCAGGATCTGAGGTATGATTTGTCTTCATGA 576 0.434 MRAVAARFSNYLCKRRPVISVQSRNFSSYSGKDELSIEQEAERKVGWLLKTIFFATAAAAGYQFFPYMGENLMQQSVSLLRVRDPLYKRMGASRLTRFAIDDERRMKILXMGGAEELLNMLSTAKDDRTRKAALEALAALSQSDKVLASLHNAGAISIIRSAPNSLEDAEVEKFKLSLLKRFQDLRYDLSS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1293 191 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 191 - -
Amo20g1293 191 SUPERFAMILY ARM repeat 75 162 IPR016024 -
Amo20g1293 191 Gene3D - 48 180 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1293 Amo-Chr20 27012185 27016855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1293 - - gmx:100527372 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1293 20 27012185 27016855 Amo20g1293 20 27012185 27016855 ECH
Amo20g1293 20 27012185 27016855 Amo10g0854 10 13797303 13801396 hybridization