Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0854 ATGCGCGCCGTAGCTGCTCGCTTTTCTAACTATTTATGTAAGAGGAGACCTGTGATCAGTGTTCAATCTCGTAATTTTTCATCATATAGTGGCAAAGATGAGCTATCTATTGAACAAGAAGCTGAGAGAAAAGTTGGATGGCTATTAAAGACGATATTTTTCGCCACAGCTGCAGCCGCAGGATACCAGTTCTTTCCTTATATGGGAGAGAACTTGATGCAGCAGTCAGTTTCACTTTTGCGCGTCAGGGATCCCTTGTATAAAAGGATGGGAGCTTCTAGGTTGACTCGATTTGCAATAGATGATGAAAGAAGGATGAAGATACTTGAGATGGGTGGAGCTAAAGAGCTCTTAAATATGTTAAGCACGGCTAAGGATGACCGCACACGAAAAGCAGCTTTGGAGGCTCTTGCTGCATTGTCACAATCAGATAAAGTTCTTGCGTCGCTGCACAATGCTGGGGCCATTTCAATCATTAGGTCTGTACCAAATTCACTTGAGGATGCAGAAGTTGAGAAATTCAAGTTGAGCTTGATGAAGAGGTTCCAGGATCTGAGGTATGATTTGTCTTCATGA 576 0.4288 MRAVAARFSNYLCKRRPVISVQSRNFSSYSGKDELSIEQEAERKVGWLLKTIFFATAAAAGYQFFPYMGENLMQQSVSLLRVRDPLYKRMGASRLTRFAIDDERRMKILEMGGAKELLNMLSTAKDDRTRKAALEALAALSQSDKVLASLHNAGAISIIRSVPNSLEDAEVEKFKLSLMKRFQDLRYDLSS* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0854 191 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 191 - -
Amo10g0854 191 SUPERFAMILY ARM repeat 77 162 IPR016024 -
Amo10g0854 191 Gene3D - 48 173 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0854 Amo-Chr10 13797303 13801396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0854 - - gmx:100527372 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1293 20 27012185 27016855 Amo10g0854 10 13797303 13801396 hybridization