Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1213 ATGGCGAATACTCTAAACAGCGCTACCATCTCCAGAACCCAATTCGGAGATCAATGCCCCTCTTTCCATTCCGTGATTCCTCCACCTACTCGTAGATCTCTTCCTTTCATAACGGTGCATAAGGGAAAACGTGTTGAGCTGAATAGAAGAAGAGCTCTTGTGGCGGTTGTGAAAGCGAAGAGTAGTAGCTTTGAAGATTCAGAATCTTTTGGTGTTGATATTTCTTTGAGTCCGAGGGTTAATGCTGTTAAGCCTTCTAAGACTGTTGCCATAAGTGACCAGGCCACTGCTCTTGTCGAAGCCGGAGTGCCGGTTATTCGCTTGGCCGCCGGAGAACCTGATTTCGATACACCTGCCGTCATAGCTGAGGCTGGGATTAATGCTATTCGCGAAGGATACACAAGGTACACCCCTAATGCCGGAACATTTGAATTGCGCAGCGCGATTTGTCATAAGTTGAAGGAGGAGAATGGAATTACATATACTCCTGATCAGATTGTGGTAAGCAATGGAGCAAAGCAGAGTATTGCTCAGGCAGTACTTGCAGTTTGTTCACCGGGCGATGAGGTCATTATTCCGGCCCCATTTTGGGTGAGTTACCCAGAAATGGCAAGATTGGCTGATGCAACACCTGTGATTCTTCCAACCAGCATATCTGATAATTTTCTTTTGGATCCCAAACTCCTTGAATCCAAAATCACTGAAAAATCAAGAGTACTTATTCTTTGCTCGCCATCTAACCCAACAGGGTCAGTCTATCCAAAGAAATTACTTGAAGAGATAGCCCAAATTGTAGCAAAGCACCCCAGGCTTCTGGTCATCTCTGATGAAATTTATGAACACATAATTTATGCACCAGCAACTCATACGAGCTTTGCATCTTTACCTGGCATGTGGGACAGGACTCTTACTGTGAACGGTTTTTCCAAGGCATTTGCAATGACTGGTTGGCGACTTGGATATATTGCTGGCCCGAAACATTTTATTGCAGCATGCGGAAAGCTTCAAAGTCAGTTCACTTCAGGGGCAAGTAGTATATCCCAGAAAGCTGCAGTTGCTGCCTTAGGGCTAGGCTATGCTGGTGGGGAGGCTGTTTCTACCATGGTGAAAGCATTCAGGGAACGAAGAGATTTCTTGGTTAGAAGTTTTAGAGAGATGGATGGTGTGAAAATATCAGAACCTCAGGGAGCATTTTATCTATTCCTTGATTTCAGCTCCTACTACGGAAGAGAAGTTGATGGTTTCGGTAAAATTGAGAATTCTGAGTCCCTCTGTCGATACCTTCTAGACAAGGGCCAGGTTGCTCTGGTGCCGGGAAGTGCATTCGGAGATGACACTTGCATCCGCATCTCTTATGCTGCATCCCTTACTACCTTACAGGCAGCTGTAGAGAGAATTAAGAAAGCACTTATCCCTCTAATCTCTGCTGCTCTTGTTTGA 1440 0.4528 MANTLNSATISRTQFGDQCPSFHSVIPPPTRRSLPFITVHKGKRVELNRRRALVAVVKAKSSSFEDSESFGVDISLSPRVNAVKPSKTVAISDQATALVEAGVPVIRLAAGEPDFDTPAVIAEAGINAIREGYTRYTPNAGTFELRSAICHKLKEENGITYTPDQIVVSNGAKQSIAQAVLAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTSISDNFLLDPKLLESKITEKSRVLILCSPSNPTGSVYPKKLLEEIAQIVAKHPRLLVISDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFIAACGKLQSQFTSGASSISQKAAVAALGLGYAGGEAVSTMVKAFRERRDFLVRSFREMDGVKISEPQGAFYLFLDFSSYYGREVDGFGKIENSESLCRYLLDKGQVALVPGSAFGDDTCIRISYAASLTTLQAAVERIKKALIPLISAALV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1213 479 CDD AAT_like 106 468 - -
Amo20g1213 479 Gene3D - 135 357 IPR015421 GO:0003824
Amo20g1213 479 SUPERFAMILY PLP-dependent transferases 76 470 IPR015424 -
Amo20g1213 479 Pfam Aminotransferase class I and II 104 466 IPR004839 GO:0009058|GO:0030170
Amo20g1213 479 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 28 471 - -
Amo20g1213 479 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 28 471 - -
Amo20g1213 479 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 307 320 IPR004838 GO:0003824|GO:0009058|GO:0030170
Amo20g1213 479 Gene3D Aspartate Aminotransferase, domain 1 89 464 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1213 Amo-Chr20 24257082 24260498 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1213 K15849 - gmx:100776446 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo03g2974 03 121800549 121804427 Amo20g1213 20 24257082 24260498 PCT