Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g2974 ATGGAGAAGAAGCAGAGTAGTGCAGCGGCCATGGGGGTTGATGACTCCTTGAACCCACGAGTCGACGCCGTGAAGCCTTCAAGGACTGTGGCCATAAGCGACCAAGCAAACGCACTGGTTCAAGCTGGCGTCCCCGTTATTCGCCTGGCCGCCGGGGAGCCCGATTTCGACACTCCCGCTCCCATTGCTGAGGCTGGGATTAATGCAATTCGTGAAGGCCATACAAGGTACACCCCGAATGCCGGAACATTACAATTACGCCAGGCTATTTCTCATAAGCTCAAAGAGGAGAACGGGATCACTTACGCCCCTGATCATATTGTGCTTAGTAATGGAGCCAAGCAGAGTCTTGCCCAGGCCGTTCTTGCAGTTTGCTCCCCGGGAGACGAGGTCATTATTCCTGCTCCATATTGGGTGAGTTACCCAGAAATGGCAAGATTGGCTGATGCTGTACCTGTTATTCTTCCAACATCAATAGATAATCATTTCCTTTTGGACCCCAAACTCCTTCAATCCAAAATTACTCAAAGATCAAGGCTTCTCATTCTTTGCTCGCCATCTAACCCAACAGGATCTGTCTACCCCAAGAAATTACTTCAAGACATAGCCCACATTGTAGCAAACCACCCCAGGCTTCTGATTCTCTCTGATGAGATTTACGAGCATATAATTTATGCACCAGCAACTCATACAAGCTTTGCATCACTACCAGGAATGTGGGACAGAACCTTAACTGTGAACGGATTTTCCAAGGCCTTTGCAATGACTGGATGGCGGCTTGGATATATTGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATTCAAAGTCAGTTCACTACAGGGCCCAATAGCATAGCTCAGAAAGCTGGAGTTGCAGCGTTAGGACTAGGCTATGCTGGTGGGGAAATTGTAGCTAATATGGTGAAAGCATTTCGGGAGCGCCGAGATTTCTTGGTTAAAAGTTTTAGGGAAATGGAGGGTCTTAAAATATCAGAACCCCAGGGGGCATTTTATCTATTCATTGATTTAAGCTACTACTATGGAAGAGAAGCTGAAGGATTTGGTAGAATTGATGATTCGGAGTCCCTTTGTCGATATCTTTTGGATAAGGGCCAGGTGGCCTTGGTGCCTGGGAGTGCATTTGGAGATGATACTTGTGTTCGGATATCATATGCAGAATCCCTTACTATCCTTCAAGAAGCTGTGGAGAGAATTAAGAAAGCACTCGCCCCTCTCAGCTCTGCTGCACTCCGTTAA 1263 0.4711 MEKKQSSAAAMGVDDSLNPRVDAVKPSRTVAISDQANALVQAGVPVIRLAAGEPDFDTPAPIAEAGINAIREGHTRYTPNAGTLQLRQAISHKLKEENGITYAPDHIVLSNGAKQSLAQAVLAVCSPGDEVIIPAPYWVSYPEMARLADAVPVILPTSIDNHFLLDPKLLQSKITQRSRLLILCSPSNPTGSVYPKKLLQDIAHIVANHPRLLILSDEIYEHIIYAPATHTSFASLPGMWDRTLTVNGFSKAFAMTGWRLGYIAGPKHFVAACGKIQSQFTTGPNSIAQKAGVAALGLGYAGGEIVANMVKAFRERRDFLVKSFREMEGLKISEPQGAFYLFIDLSYYYGREAEGFGRIDDSESLCRYLLDKGQVALVPGSAFGDDTCVRISYAESLTILQEAVERIKKALAPLSSAALR* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g2974 420 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 8 416 - -
Amo03g2974 420 MobiDBLite consensus disorder prediction 1 20 - -
Amo03g2974 420 SUPERFAMILY PLP-dependent transferases 17 411 IPR015424 -
Amo03g2974 420 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 248 261 IPR004838 GO:0003824|GO:0009058|GO:0030170
Amo03g2974 420 PANTHER GLUTAMATE-OXALOACETATE TRANSAMINASE5 8 416 - -
Amo03g2974 420 CDD AAT_like 47 409 - -
Amo03g2974 420 Gene3D Aspartate Aminotransferase, domain 1 30 405 IPR015422 GO:0003824
Amo03g2974 420 Gene3D - 76 298 IPR015421 GO:0003824
Amo03g2974 420 Pfam Aminotransferase class I and II 45 407 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g2974 Amo-Chr3 121800549 121804427 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g2974 K15849 - gmx:100776446 695.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo03g2974 03 121800549 121804427 Amo20g1213 20 24257082 24260498 PCT