Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g1087 ATGAAGATGATTCATAATATATTGAAAATGCAACAACACTCTTATAGTAACCAAAAAATGGAGGAGCAAATGAGAAAAGCTGAGGAATCATCATGGCTAGGAACCAAGAGAGGAAAATTTGGCATGAAAGATAACAACAGCAACAGCAAGAAGTACTCTTCTTCCTTCGACAAACTGAAGAGGGAGTTAGACGATCGGAGATATTCCGAGGAGATGGCAATGAGCACTGTTTCCGATTTTAAAAGGAGGGTTCTAGAATTGGAAACCGAGCTCAACAAGAGAAAAGAATCCGAGGCAAATTTGTTTGAAACTTTGGTTGTCCAGACAAAGCAACTTGAACAAAGCAAGATTTTTCTCGAAGAGTCGAAAATCGAAGTTGCTTCTCTCAAAGAGAAGATAAAAGCAATTCAACAGGATGGAATCGAAAAAGAGGCGAAGTTGAGTGCAATACAAGGAATTCAAGATGGTGAGGCACTTTCTTCCAAGTTATATGATCTTATTGAAGAAGTGAACTCATTGAAGAATGAGTTAAAGCTGGCAACGGAGGCAGAAGAGAATAGCAAGAAGGCTATGGATGACTTAGCGTTCGCGCTTAAAGAAGTCGCAACCGAGGCAAACCAAGTGAAGGCCAAGCTTACATTGAGCCAAGTTGAACTCGAGCACGCGAAGGGCGAAGCAGAGAGATGGAGGGCAATGATGGAAAGCACGGAAGAGAAGTATAAGGAGGCTCTTGAGATGACAAGGAAAGAAGCAGATAGATACCAGAACACGGTTGAGAGGCTAAGATTGGAGGCAGAAGAATCTCTCTTAGCATGGAATGTAAAGGAAACAGAGTTTGTGAATTGCATTAAGAGGGCTGAAGAGGAAAGGTTGCTTGCGCAACAAGAAAACGCTCGATTGCTTGAATTGCTTAGGGAAGCGGAGAGCAAATCAAAGGATGACAACCATAAACTTCGTGACATACTCAAACAGGCCTTGAATGAGTCCAACGTGGCGAAAGAAGCCGCGGAGATCGCTAGGGCCGAGAATGCTAGGCTGCAGGATAGCCTAGCATTGCTAGTGCAAGAAAACGAGATGCTAAAGATTCATGAAGCTGCGTCATTTGAAAACATCAGGGAGTTAAAGCGAATGCTTTCAGAATCTACCTTAAAGGAGTATAGAAATGAGGAATTTCAGAAGTCATTTTTGTCTTCGTCATCAACGAAAGAATTGGGAAGAAGTAGATCCAGAACTAATAATTTGTCAATGGATCAAAGAGATTCTACTACCAAACAGACTAGGAGTTTGAGCAAAACTTTTAGTCTTAATCTTAAGGATATGATAATGAGTCCCAGTAGACAACAACAAAAGGTGGTAGGGAACAATAACAATAATGAAGATGCTTCAAACAGAGAAAGTCCAAGTGAGGATTCACTACTAAAGGGTTCAATTTTTGATGAGGTGGATTCATCTGATTCAGGATCCAATCACTATGATTATTTAGATATGGGAACTCCAGATATGGAGCTTTATCAGGCAGATGAATCTTTTACTGATTCTGAGAGTGAGAGAAACACGAGGAAGAGAAGGGCTTTGCTTAGAAGGTTTGGTGATCTCATAAGAAGAAAGAGTTCTCATACCAATTATCCAACCACAAGGTCAAAGGAATCATCCATTGTTGAGGAACATCAGTTACAAAACATGAATTGCTAA 1692 0.4066 MKMIHNILKMQQHSYSNQKMEEQMRKAEESSWLGTKRGKFGMKDNNSNSKKYSSSFDKLKRELDDRRYSEEMAMSTVSDFKRRVLELETELNKRKESEANLFETLVVQTKQLEQSKIFLEESKIEVASLKEKIKAIQQDGIEKEAKLSAIQGIQDGEALSSKLYDLIEEVNSLKNELKLATEAEENSKKAMDDLAFALKEVATEANQVKAKLTLSQVELEHAKGEAERWRAMMESTEEKYKEALEMTRKEADRYQNTVERLRLEAEESLLAWNVKETEFVNCIKRAEEERLLAQQENARLLELLREAESKSKDDNHKLRDILKQALNESNVAKEAAEIARAENARLQDSLALLVQENEMLKIHEAASFENIRELKRMLSESTLKEYRNEEFQKSFLSSSSTKELGRSRSRTNNLSMDQRDSTTKQTRSLSKTFSLNLKDMIMSPSRQQQKVVGNNNNNEDASNRESPSEDSLLKGSIFDEVDSSDSGSNHYDYLDMGTPDMELYQADESFTDSESERNTRKRRALLRRFGDLIRRKSSHTNYPTTRSKESSIVEEHQLQNMNC* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g1087 563 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 53 540 - -
Amo20g1087 563 Coils Coil 163 200 - -
Amo20g1087 563 Coils Coil 283 313 - -
Amo20g1087 563 MobiDBLite consensus disorder prediction 392 462 - -
Amo20g1087 563 MobiDBLite consensus disorder prediction 390 472 - -
Amo20g1087 563 Coils Coil 322 356 - -
Amo20g1087 563 Coils Coil 10 30 - -
Amo20g1087 563 Coils Coil 219 271 - -
Amo20g1087 563 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 53 540 - -
Amo20g1087 563 MobiDBLite consensus disorder prediction 24 54 - -
Amo20g1087 563 Coils Coil 119 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g1087 Amo-Chr20 20006205 20008282 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g1087 - - gmx:102667736 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1087 20 20006205 20008282 Amo10g0649 10 7966157 7968249 hybridization