Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0649 ATGCAACAACACTCTTATAGTAACCAAAAAATGGAGGAGCAAATGAGAAAAGCTGAGGAATCATCATGGCTRGGAACCAAGAGAGGAAAATTTGGCATGAAAGATAACAACAGCAACAGCAAGAAGTACTCTTCTTCCTTCGACAAACTGAAGAGGGAGTTAGACGATCGGAGATATTCCGAGGAGATGGCAATGAGCACTGTTTCCGATTTTAAAAGGAGGGTTCTAGAATTGGAAACCGAGCTCAACAAGAGAAAAGAATCCGAGGCAAATTTGTTTGAAACTTTGGTTGTCCAGACAAAGCAACTTGAACAAAGCAAGATTTTTCTCGAAGAGTCGAAAATCGARGTTGCTTCTCTCAAAGAGAAGATAAAAGCAATTCAACAGGATGGAATYGAAAAAGAGGCGAARTTGAGTGCAATACAAGGAATTCAAGATGGTGAGGCACTTTCTTCCAAGTTATATGATCTTATTGAAGAAGTGAACTCATTGAAGAATGAGTTAAAGCTGGCAACGGAGGCAGARGAGAATAGCAAGAAGGCTATGGATGACTTRGCGTTCGCGCTTAAAGAAGTCGCAACCGAGGCAAACCAAGTGAAGGCCAAGCTTACATTGAGCCAAGTTGAACTCGAGCACGCGAAGGGCGAAGCAGAGAGATGGAGGGCAATGATGGAAAGCACGGARGAGAAGTATAAGGAGGCTCTTGAGATGACAAGGAAAGAAGCAGATAGATACCAGAACACGGTTGAGAGGCTAAGRTTGGAGGCAGARGAATCTCTCYTAGCATGGAATGTAAAGGAAACAGAGTTTGTGAATTGCATTAAGAGGGCTGAAGAGGAAAGGTTGCTTGCGCAACAAGAAAACGCTCGATTGCTTGAATTGCTTAGGGAAGCGGARAGCAAATCAAAGGATGACAACCATAAACTTCGTGACATACTCAAACAGGCYTTGAATGAGTCCAACGTGGCGAAAGAAGCCGCGGAGATCGCTAGGGCCGAGAATGCTAGGCTGCAGGATAGCCTAGCATTGCTAGTGCAAGAAAACGAGATGCTAAAGATTCATGAAGCTGCGTCATTTGAAAACATCAGGGAGTTAAAGCGAATGCTTTCAGAATCTACCTTAAAGGAGTATAGAAATGAGGAATTTCAGAAGTCATTTTTGTCWTCGTCATCAACGAAAGAATTGGGAAGAAGTAGATCCAGAACTAATAATTTGTCAATGGATCAAAGAGATTCTACTACCAAACAGACTAGGAGTTTGAGCAAAACTTTTAGTCTTAATCTTAAGGATATGATAATGAGTCCCAGTAGACAACAACAAAAGGTGGTAGGRAACAATAACAATAATGAAGATGCTTCAAACAGAGAAAGTCCAAGTGAGGATTCACTACTAAAGGGTTCAATTTTTGATGAGGTGGATTCATCTGATTCAGGATCCAATCACTATGATTATTTAGATATGGGAACTCCAGATATGGAGCTTTATCAGGCAGATGAATCTTTTACTGATTCTGAGAGTGAGAGAAACACRAGGAAGAGAAGGGCTTTGCTTAGAAGGTTTGGTGATCTCATAAGAAGAAAGAGTTCTCATACCAATTATCCAACCACAAGGTCAAAGGAATCATCCATTGTTGAGGAACATCAGYTACAAAACATGAATTGCTAA 1665 0.4066 MQQHSYSNQKMEEQMRKAEESSWLGTKRGKFGMKDNNSNSKKYSSSFDKLKRELDDRRYSEEMAMSTVSDFKRRVLELETELNKRKESEANLFETLVVQTKQLEQSKIFLEESKIEVASLKEKIKAIQQDGIEKEAKLSAIQGIQDGEALSSKLYDLIEEVNSLKNELKLATEAEENSKKAMDDLAFALKEVATEANQVKAKLTLSQVELEHAKGEAERWRAMMESTEEKYKEALEMTRKEADRYQNTVERLRLEAEESLLAWNVKETEFVNCIKRAEEERLLAQQENARLLELLREAESKSKDDNHKLRDILKQALNESNVAKEAAEIARAENARLQDSLALLVQENEMLKIHEAASFENIRELKRMLSESTLKEYRNEEFQKSFLSSSSTKELGRSRSRTNNLSMDQRDSTTKQTRSLSKTFSLNLKDMIMSPSRQQQKVVGNNNNNEDASNRESPSEDSLLKGSIFDEVDSSDSGSNHYDYLDMGTPDMELYQADESFTDSESERNTRKRRALLRRFGDLIRRKSSHTNYPTTRSKESSIVEEHQLQNMNC* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0649 554 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 44 531 - -
Amo10g0649 554 Coils Coil 313 347 - -
Amo10g0649 554 MobiDBLite consensus disorder prediction 381 463 - -
Amo10g0649 554 Coils Coil 210 262 - -
Amo10g0649 554 Coils Coil 274 304 - -
Amo10g0649 554 Coils Coil 1 21 - -
Amo10g0649 554 MobiDBLite consensus disorder prediction 1 47 - -
Amo10g0649 554 Coils Coil 110 130 - -
Amo10g0649 554 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 44 531 - -
Amo10g0649 554 Coils Coil 154 191 - -
Amo10g0649 554 MobiDBLite consensus disorder prediction 10 24 - -
Amo10g0649 554 MobiDBLite consensus disorder prediction 383 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0649 Amo-Chr10 7966157 7968249 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0649 - - gmx:102667736 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g1087 20 20006205 20008282 Amo10g0649 10 7966157 7968249 hybridization