Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0916 ATGGAGATATTTCGCAAAATTGATGGCCTTGCTGAGGAGATCCAAAGGTCTCAACCACCAATAGCTTTATGGAGGAAATTTATCTATTGCACTTCCCTCTCTGGTTCAGTTCTTGGATCTGTAGATCACATACAACCTCAAGATCTTGAGCGTGTTGTCAGCCCGGTCTCTGTTGCACACTTCTCGCAGTACAAGCTAACTATGCTACTCCGAAAGCAGCTTGAAAATCTAGGCTTTAAAATATGTGCAGCTGAAAGCTCAGAAGGACATGAACATTTTTGTGAAAAGAAAATCATGATGGGTCATGAGTGTGTATCTATTGATGCCAGTAATAGTGACTTTCTCACCATCACTGCATCTACAATTGATAAAGGGAGGCGTGTAGAGTGGAATATCAATTGTAACATCCTCATTGGTGCAGATGGAGCAGGAAGTACTGTGAGAAAGCTTGTAGGAATAGAAATGAGAGGTGAGAAAGACTTGCAAAAGCTTGTTAGTGTCCATTTCTTTAGCAAAGGCCTTGGGCAGTTTCTGCTTCAGGAAAATCCCGGTATGCTATTTTTCATATTTAATACTGAAGCTATTGGCGTCCTTGTTGCTCATGACCTGAGGCAAGGGGAATTTGTATTGCAGATACCTTTTTATCCACCTCAGCAAACCATTCAGGATTTCAGCCCAAAGGCTTGTGAGAAGTTAATCATTAAACTTATTGGTCGCAAGTTCAGAGACATAGATGTAATTGACATAAAACCATGGATTATGCATGCTGAAGTTGCTGAAAGGCTTACATGTTGTGGCAACCGAATCCTGCTTGCCGGTGATGCCGCTCATCGGTTTCCTCCTGCCGGTGGTTTTGGAATGAATACTGGCATACAGGATGCTCATAATCTTTCCTGGAAAATTGCTTCTGTGATGAAGGGTATTGCTCCATTTTCGATGTTAAATACTTACGACATTGAACGTAGACCAATTGCTGTATGTAATACAGAATTAAGTCTAAAGAACTTTAGAGCTGCCATGTCTGTCCCTGCTGCACTTGGTCTTGACCCAACTGTTGCAAACACTGTACATCAATTTATCATTAATGGGGTTGGTTCCATTTTACCATCTGGATTGCAGAAGGTAGCTTTGGATGGAATTTTTGCATTAGGCCGTGCCCAGCTCTCGAAATCTCTCCTGAATGAAAGTAACCCTCTTGGATCGTCAAGGTTGGCGAAGCTAAGACATATATTTGAAGAAGGAAAGAGCCTTCAACTCCAGTTTCCTGCTGAAGATCTTGGATTCAGGTACCTGCAAGGAGCATTGGTGCCAGAGAGTAATGATATTGATATTCCTGCTGAAGTTCCTACAGGTCATCGGAGGGACTATGTCCCTTCAGCGTCTCCTGGATCAAGACTTCCCCATATGTTTGTGAGACTAAACAGACTGACTGAGGAGATTGTATCTACACTTGATCTTGTCTCTGGGGATAAAGTTGAGTTCGTTCTCATCATAGCACCTTTGGAGAAATCTTATCATCTTGCTCGTGAAGCATTCAAGGTTGCAGAGAAATTCCAAGTGTCTCTCAAAGTGTGTGTTTTATGGCCTACTGATTCTGTTGAAGAACTTGAGAATGGAAGCAAGGCTGCATTATCACCATGGAAGAATTATGCTGATGTATATGAAATCAAGAGATCAAAAAGATCAAATTGGTGGGATATGTGTAAAATGACAAACAGGGGAGCTATTTTAGTTAGACCTGACGAACATATTGCCTGGCGCACAACTTCTGAACTTGCTGGAGATCCAAGATTGGAGATGCAGAGGGTTTTTTCAGCTATATTGGGAGTAAACTAA 1836 0.4183 MEIFRKIDGLAEEIQRSQPPIALWRKFIYCTSLSGSVLGSVDHIQPQDLERVVSPVSVAHFSQYKLTMLLRKQLENLGFKICAAESSEGHEHFCEKKIMMGHECVSIDASNSDFLTITASTIDKGRRVEWNINCNILIGADGAGSTVRKLVGIEMRGEKDLQKLVSVHFFSKGLGQFLLQENPGMLFFIFNTEAIGVLVAHDLRQGEFVLQIPFYPPQQTIQDFSPKACEKLIIKLIGRKFRDIDVIDIKPWIMHAEVAERLTCCGNRILLAGDAAHRFPPAGGFGMNTGIQDAHNLSWKIASVMKGIAPFSMLNTYDIERRPIAVCNTELSLKNFRAAMSVPAALGLDPTVANTVHQFIINGVGSILPSGLQKVALDGIFALGRAQLSKSLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAEDLGFRYLQGALVPESNDIDIPAEVPTGHRRDYVPSASPGSRLPHMFVRLNRLTEEIVSTLDLVSGDKVEFVLIIAPLEKSYHLAREAFKVAEKFQVSLKVCVLWPTDSVEELENGSKAALSPWKNYADVYEIKRSKRSNWWDMCKMTNRGAILVRPDEHIAWRTTSELAGDPRLEMQRVFSAILGVN* 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0916 611 Pfam FAD binding domain 1 326 IPR002938 GO:0071949
Amo20g0916 611 Gene3D - 1 325 IPR036188 -
Amo20g0916 611 Gene3D - 423 610 - -
Amo20g0916 611 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 1 606 - -
Amo20g0916 611 Gene3D - 21 261 - -
Amo20g0916 611 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 1 606 - -
Amo20g0916 611 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 133 148 - -
Amo20g0916 611 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 297 - -
Amo20g0916 611 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 317 333 - -
Amo20g0916 611 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 266 281 - -
Amo20g0916 611 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 317 - -
Amo20g0916 611 SUPERFAMILY FAD/NAD(P)-binding domain 56 346 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0916 Amo-Chr20 15231708 15235642 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0916 - - gmx:100794253 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0916 20 15231708 15235642 Amo10g0487 10 4909874 4915100 hybridization