Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo10g0487 ATGGGGTTTCTAAGATTTATGAGAAGACATAATTACCCTTTCAAAAATAAAACTGGGAATCAAGCACACCTACTCCGGTGCATGCAAAGTAGAGGTTTCTCAAAGAATGAAGTTGTTGATGGCAATAATGCCGTGCTTCCTGTTCTAATCATTGGAGCAGGACCCGTAGGTCTTGTTCTCTCTATTCTTCTCACCAAATTAGGAATTAAATGTGCTGTTTTAGAGAGAAACAAGACATTTTCTAAACATCCACAAGCACACTTCATCAACAATCGATCCATGGAGATATTTCGCAAAATTGATGGCCTTGCTGAGGAGATCCAAAGGTCTCAACCACCAATAGMTTTATGGAGGAAATTTATCTATTGCACTTCCCTCTCTGGTTCAGTTCTTGGATCTGTAGATCACATACAACCTCAAGATCTTGAGCRTGTTGTCAGCCCRGTCTCTGTTGCACACTTCTCGCAGTACAAGCTARCTATGCTACTCCGAAAGCAGCTTGAAAATCTAGGCTTTAAAATATGTGCAGCTGAAAGCTCAGAAGGACATGAACATTTTTGTGAAAAGAAAATCATGATGGGYCATGAGTGTGTATCTATTGATGCCAGTAATAGTGACTTTCTCACCATCACTGCATCTACAATTGATAAAGGGAGGCGTGTAGAGTGGAATATCAATTGTAACATCCTCATTGGTGCAGATGGAGCAGGAAGTACTGTGAGAAAGCTTGTAGGAATAGAAATGAGAGGTGAGAAAGACTTGCAAAAGCTTGTTAGTGTCCATTTCTTTAGCAAAGGCCTTGGGCAGTTTCTGCTTCAGGAAAATCCCGGTATGCTATTTTTCATATTTAATACTGAAGCTATTGGCGTCCTTGTTGCTCATGACCTGAGGCAAGGGGAATTTGTATTGCAGATACCTTTTTATCCACCTCAGCAAACCATTCAGGATTTCAGCCCAAAGGCTTGTGAGAAGTTAATCATTAAACTTATTGGTCGCAAGTTCGGAGACATAGATGTAATTGACATAAAGCCATGGATTATGCATGCTGAAGTTGCTGAAAGGCTTACATGTTGTGGCAACCGAATACTGCTTGCCGGTGATGCCGCTCATCGGTTTCCTCCTGCCGGTGGTTTTGGAATGAATACTGGCATACAGGATGCTCATAATCTTTCCTGGAAAATTGCTTCTGTGATGAAGGGTATTGCTCCATTTTCGATGTTAAATACTTACGACATTGAACGTAGACCAATTGCTGTATTTAATACAGAATTAAGTCTAAAGAACTTTAGAGCTGCCATGTCTGTCCCTGCTGCACTTGGTCTTGACCCAACTGTTGCAAACACTGTACATCAATTTATCATTAATGGGGTTGGTTCCATTTTACCATCTGGATTGCAGAAGGTAGCTTTGGATGGAATTTTYRCATTAGGCCGTGCCCAGCTCTCGAAATCTCTCCTGAATGAAAGTAACCCTCTTGGATCGTCAAGGTTGGCGAAGCTAAGACATATATTTGAAGAAGGAAAGAGCCTTCAACTCCAGTTTCCTGCTGAAGATCTYGGATTCAGGTACCTGCAAGGAGCATTGGTGCCAGAGAGTAATGATATTGATATTCCTGCTGAAGTTCCTACAGGTCGTCGGAGGGACTATGTCCCTTCAGCGTCTCCTGGATCAAGACTTCCCCATATGTTTGTGAGACTAAACAGGCTGACTGAGGAGATTGTATCTACACTTGATCTTGTCTCTGGGGATAAAGTTGAGTTCGTTCTCATCATAGCACCTTTGGAGGAATCTTATCATCTTGCTCGTGAAGCATTCAAGGTTGCAGAGAAATTCCAAGTGTCTCTCAAAGTGTGTGTTTTATGGCCTACTGATTCTGTTGAAGAACTTGAGAATGGAAGCAAGTCTGCATTATCACCATGGAAGAATTATGCTGATGTATATGAAATCAAGAGATCCAAAAGATCAAATTGGTGGGATATGTGTAAAATGACAAACAGGGGAGCTATTTTAGTTAGACCTGACGAACATATTGCCTGGCGCACAACTTCTGAACTTGCTGGAGATCCAAGATTGGAGATGCAGAGGGTTTTTTCAGCTATATTGGGAGTAAACTAA 2115 0.4137 MGFLRFMRRHNYPFKNKTGNQAHLLRCMQSRGFSKNEVVDGNNAVLPVLIIGAGPVGLVLSILLTKLGIKCAVLERNKTFSKHPQAHFINNRSMEIFRKIDGLAEEIQRSQPPIXLWRKFIYCTSLSGSVLGSVDHIQPQDLEXVVSPVSVAHFSQYKLXMLLRKQLENLGFKICAAESSEGHEHFCEKKIMMGHECVSIDASNSDFLTITASTIDKGRRVEWNINCNILIGADGAGSTVRKLVGIEMRGEKDLQKLVSVHFFSKGLGQFLLQENPGMLFFIFNTEAIGVLVAHDLRQGEFVLQIPFYPPQQTIQDFSPKACEKLIIKLIGRKFGDIDVIDIKPWIMHAEVAERLTCCGNRILLAGDAAHRFPPAGGFGMNTGIQDAHNLSWKIASVMKGIAPFSMLNTYDIERRPIAVFNTELSLKNFRAAMSVPAALGLDPTVANTVHQFIINGVGSILPSGLQKVALDGIFXLGRAQLSKSLLNESNPLGSSRLAKLRHIFEEGKSLQLQFPAEDLGFRYLQGALVPESNDIDIPAEVPTGRRRDYVPSASPGSRLPHMFVRLNRLTEEIVSTLDLVSGDKVEFVLIIAPLEESYHLAREAFKVAEKFQVSLKVCVLWPTDSVEELENGSKSALSPWKNYADVYEIKRSKRSNWWDMCKMTNRGAILVRPDEHIAWRTTSELAGDPRLEMQRVFSAILGVN* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo10g0487 704 Gene3D - 516 703 - -
Amo10g0487 704 SUPERFAMILY FAD/NAD(P)-binding domain 47 439 IPR036188 -
Amo10g0487 704 Pfam FAD binding domain 47 418 IPR002938 GO:0071949
Amo10g0487 704 PANTHER FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN 46 699 - -
Amo10g0487 704 PANTHER TRK SYSTEM POTASSIUM UPTAKE PROTEIN 46 699 - -
Amo10g0487 704 Gene3D - 47 418 IPR036188 -
Amo10g0487 704 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 226 241 - -
Amo10g0487 704 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 359 374 - -
Amo10g0487 704 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 47 69 - -
Amo10g0487 704 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 374 390 - -
Amo10g0487 704 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 392 410 - -
Amo10g0487 704 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 410 426 - -
Amo10g0487 704 Gene3D - 114 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo10g0487 Amo-Chr10 4909874 4915100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo10g0487 - - gmx:100794253 1186.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0916 20 15231708 15235642 Amo10g0487 10 4909874 4915100 hybridization