Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0721 ATGTTGGGGTTAGTGATTGTGATTGTGGGTGATGTAGTTTATGGTCAAGACTCAATACAAGACCTCCTTAATGCTCACAATTCTGCAAGATCAGCGGTTGGAGTTCCAAATTTGGTTTGGGATGATGTTGTTGCAAGCTATGCTGAAAGATATGCAAATGAGCGTAGAGATTGCCAATTGATCCATTCATCAGGTGGGCCCTATGGTGAGAACATTGCAATGGGTTGGGGAGGTTATATTGTTTCAGGCACTGATGCCGTGAGATTGTGGGTAAATGAGAAGCCATATTATGATTATAATTTTAACACTTGTGTTGGTGGTGTGGATTGTCTTCACTATACTCAAATTATTTGGAGAAATTCATTGCGCGTTGGATGTGCCAAAGTAACTTGTAATAACGGTGGTGTTTTTGTTACATGTAATTATGATCCTCCCGGTAACATTATTGGAGAGAGACCTTACTAA 465 0.4 MLGLVIVIVGDVVYGQDSIQDLLNAHNSARSAVGVPNLVWDDVVASYAERYANERRDCQLIHSSGGPYGENIAMGWGGYIVSGTDAVRLWVNEKPYYDYNFNTCVGGVDCLHYTQIIWRNSLRVGCAKVTCNNGGVFVTCNYDPPGNIIGERPY* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0721 154 ProSitePatterns CRISP family signature 2. 137 148 IPR018244 GO:0005576
Amo20g0721 154 PANTHER PATHOGENESIS-RELATED PROTEIN 1B-LIKE 10 154 - -
Amo20g0721 154 Pfam Cysteine-rich secretory protein family 23 142 IPR014044 -
Amo20g0721 154 CDD CAP_PR-1 20 154 - -
Amo20g0721 154 PRINTS Allergen V5/Tpx-1 family signature 38 56 IPR001283 -
Amo20g0721 154 PRINTS Allergen V5/Tpx-1 family signature 86 99 IPR001283 -
Amo20g0721 154 PRINTS Allergen V5/Tpx-1 family signature 110 126 IPR001283 -
Amo20g0721 154 PRINTS Allergen V5/Tpx-1 family signature 137 150 IPR001283 -
Amo20g0721 154 SUPERFAMILY PR-1-like 15 154 IPR035940 -
Amo20g0721 154 Gene3D CAP 13 154 IPR035940 -
Amo20g0721 154 SMART SCP_3 17 150 IPR014044 -
Amo20g0721 154 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 10 154 IPR001283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0721 Amo-Chr20 10497213 10497677 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0721 K13449 - gmx:547547 218.779
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0721 20 10497213 10497677 Amo20g0721 20 10497213 10497677 ECH
Amo20g0721 20 10497213 10497677 Amo10g0023 10 308729 321677 hybridization