Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0459 ATGCAAATAAAACCACACACAACAACACCTCTCTTCAAAAACACCCCAAAGCCAAAACCAAAAACACCACTCTCTCTCTCTCTCTCTCCCATGGCTACCACAGACCCGGCAGAGAAGCTGAAATTAGAAACAAGCTTCGACTATGAGAAGAACGAAGAGAAAAAAGAAGAAGAAGAAGAAGTGTCGCCGGTTGAAGAAGTGCGACTAACGGTTTCGAACACTGACGATCCAAGCCAACCAGTGTGGACCTTCAGAATGTGGTTCTTAGGTCTAATCTCATGCGCGCTATTATCTTTCCTCAACCAGTTCTTCGCTTACCGTACGGAGCCACTCATCATAACTCAGATCACCGTTCAGATCGCCACACTTCCCATCGGTCACTTCATGGCGGCGGTGCTGCCAACTACCAAGTTTCGCCTCGGATCCAAAACGATGTCGTTTAATCCGGGCCCCTTTAACATGAAGGAGCACGTGCTCATAACCATATTCGCGAATGCGGGTAGCGCTTTCGGGTCCGGGTCGCCCTATGCGGTGGGTATTGTGAACATAATTAAGGCCTTTTATGGACGCAGCATCTCTTTCTTTGCTTCCTGGCTTCTCATCATTACTACTCAGGTTCTGGGTTATGGATGGGCTGGGTTGCTAAGGAAGTACGTTGTGGAACCAGCTCATATGTGGTGGCCTGGCACTCTCGTTCAAGTCTCACTTTTCCGAGCTTTGCATGAGAAAGACAACAGCCATGGAATTTCACGGGCAAAGTTCTTCTTCATTGCACTAGTGTGCAGTTTTTCATGGTACGTGGTACCTGGATTCTTCTTCACAACGCTAACAAACATCTCATGGGTCTGTTGGGTGTTCTCCAAATCAGTAACAGCTCAACAACTAGGCTCAGGCATGAGAGGCTTAGGCCTTGGAGCCATCACACTTGATTGGAGCGCCGTGGCATCGTTCTTGTTCAGCCCTCTCATCTCGCCCTTTTTCGCCATTGTCAATGTCTTTGTTGGCTATGCAATGATAGTATATGTGGTTATTCCTATTGCATATTGGGGTTTGAATGTGTATAATGCAAATAGATTCCCTATTTTTTCATCACATTTGTTCACATCTCAAGGTCAACCTTATAACATATCTGCTATTGTTAATGACAAGTTTGAGTTGGATATTGCCAAGTATCAAGAGCAAGGAAGAATCAATCTTAGTGTCTTTTTTGCTCTCACTTATGGTTTTGGATTTGCTACCATTGCATCTACCATCACACACGTTGCTTGCTTCTATGGAAGGGAGATTATGGAACGTTATCGTGCTTCATTCAAAGGCAAAGAAGATATCCACACAAAACTGATGAAGACATACAAAGACATACCATCTTGGTGGTTTCATTTGTTACTAGGTGTTGCTTTAATGGTTTCTCTAGCACTATGCATCTTTTTAAAAAACCAAGTTCAAATGCCATGGTGGGGACTTCTCTTTGCCGCGGTCTTAGCCTTTGGATTTACCCTTCCAATTAGCATCATTACTGCCACCACAAACCAGACACCAGGGTTGAATATCATCACCGAGTATGTCTTTGGTCTCATATACCCTGGAAGACCAATTGCAAATGTTTGCTTCAAAACTTATGGCTACATCAGCATGTCTCAAGCCGTCTCGTTTCTCAGTGATTTCAAGCTTGGACACTACATGAAAATCCCCCCAAGATCAATGTTCTTGGTGCAGTTCATAGGTACAATGCTTGCTGGAACTATCAACATAGGGGTAGCATGGTGGTTGCTAAACTCTATAAAAAACATATGCCATGATGATCTCCTTCCAGAAGGGAGTCCCTGGACATGCCCCGGTGACCGTGTATTCTTTGATGCATCAGTAATCTGGGGATTGGTAGGACCAAAGAGAATCTTTGGCTCCAAAGGAAACTACAGTGCAATGAATTGGTTCTTCCTTGGTGGTGCAATAGGGCCAGTTATTGTTTGGCTATTGCACAAGGCATTCCCTAAACAATCATGGATACCCTTCATCAACCTCCCAGTTCTCCTTGGAGCAACCGGGATGATGCCACCCGCGACACCATTGAACTACAATGCCTGGATTTTCTTTGGAACCATTTTCAACTTCTTTGTGTTCCGATACAGGAAGGGTTGGTGGCAGAGATATAACTACGTCCTATCGGCCGCCCTTGATGCCGGGGTGGCGTTTATGACTGTGCTGCTGTTCTTTTCTCTGGGATTGGAGAACAAGAGTATTAGTTGGTGGGGAAATGATGGTGAACATTGTCCATTAGCATCTTGTCCAACAGCCAAAGGCATTGTGGTTGATGGTTGCCCAACACACTAA 2331 0.4496 MQIKPHTTTPLFKNTPKPKPKTPLSLSLSPMATTDPAEKLKLETSFDYEKNEEKKEEEEEVSPVEEVRLTVSNTDDPSQPVWTFRMWFLGLISCALLSFLNQFFAYRTEPLIITQITVQIATLPIGHFMAAVLPTTKFRLGSKTMSFNPGPFNMKEHVLITIFANAGSAFGSGSPYAVGIVNIIKAFYGRSISFFASWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPGTLVQVSLFRALHEKDNSHGISRAKFFFIALVCSFSWYVVPGFFFTTLTNISWVCWVFSKSVTAQQLGSGMRGLGLGAITLDWSAVASFLFSPLISPFFAIVNVFVGYAMIVYVVIPIAYWGLNVYNANRFPIFSSHLFTSQGQPYNISAIVNDKFELDIAKYQEQGRINLSVFFALTYGFGFATIASTITHVACFYGREIMERYRASFKGKEDIHTKLMKTYKDIPSWWFHLLLGVALMVSLALCIFLKNQVQMPWWGLLFAAVLAFGFTLPISIITATTNQTPGLNIITEYVFGLIYPGRPIANVCFKTYGYISMSQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTMLAGTINIGVAWWLLNSIKNICHDDLLPEGSPWTCPGDRVFFDASVIWGLVGPKRIFGSKGNYSAMNWFFLGGAIGPVIVWLLHKAFPKQSWIPFINLPVLLGATGMMPPATPLNYNAWIFFGTIFNFFVFRYRKGWWQRYNYVLSAALDAGVAFMTVLLFFSLGLENKSISWWGNDGEHCPLASCPTAKGIVVDGCPTH* 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0459 776 MobiDBLite consensus disorder prediction 1 62 - -
Amo20g0459 776 PANTHER OLIGOPEPTIDE TRANSPORTER 4 54 775 - -
Amo20g0459 776 MobiDBLite consensus disorder prediction 40 62 - -
Amo20g0459 776 Pfam OPT oligopeptide transporter protein 82 739 IPR004813 GO:0035673
Amo20g0459 776 MobiDBLite consensus disorder prediction 1 32 - -
Amo20g0459 776 TIGRFAM ISP4_OPT: small oligopeptide transporter, OPT family 60 744 IPR004648 GO:0055085
Amo20g0459 776 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 65 742 IPR004813 GO:0035673
Amo20g0459 776 PANTHER ISP4 LIKE PROTEIN 54 775 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0459 Amo-Chr20 5700981 5707180 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo20g0459 57 774 Organic Solute Cotransporters AT5G64410 80.166 0.0 1231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0459 - - ahf:112714781 1509.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0459 20 5700981 5707180 Amo20g0459 20 5700981 5707180 ECH
Amo13g3999 13 132699736 132703269 Amo20g0459 20 5700981 5707180 PCT