Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g3999 ATGGCTTCAGAGACCATGAAGAACGTCAAAACAGACCCAGAGATGTCGAAATCAGACAAGGAACTGAAACAAGATGAAGAAGAAGTTTCTCCGATTGAGGAAGTGAGACTCACTGTGGCCAACACGGACGACCCAACCCAACCCGTTTGGACCTTCCGCATGTGGTTCCTGGGGCTTATCTCTTGCTGCCTCCTCTCCTTCCTGAACCAGTTTTTCGCCTACAGGGCGGAGCCCCTCGTCATTACGCAGATCACGGTGCAGGTGGCCACACTGCCGATAGGGCGATTCATGGCCAGAGTCCTCCCCACCACGAAGTTCGGGATAGGGTCAAAGAAATTCTCCTTGAATCCGGGACCTTTCAACATGAAGGAGCACGTGCTGATTACCATATTTGCGAACGCCGGCACCGCCTTCGGGTCGGGGTCGCCGTACGCGGTGGGGATCGTGAACATCATCAAGGCGTTCTACGGAAGGTCGATCTCGTTCGTGGTTGCATGGCTGCTGATCATCACTACTCAGGTGTTAGGATACGGGTGGGCAGGGTTGCTGAGGAAGTACGTGGTGGAGCCAGCCCATATGTGGTGGCCCGGCAACCTTGTCCAAGTTTCTCTTTTCCGAGCTCTGCATGAGAAAGAAGATGGGCGCAGAATTTCAAGGGCAAAGTTCTTCTTCATTGCRCTACTCTGCAGCTTCTCATGGGCCGTGCTCCCTGGATACTTGTTRCAGACCCTCACAAGCATTTCATGGCTCTGCTGGGTGTTCTCCAAGTCAGTCACCGCTCAACAGATTGGCTCAGGCATGAACGGTTTGGGTTTGGGAGCCCTCACTCTCGACTGGTCCGCCGTTGCCTCCTTCTTGTTCAGCCCTCTRGTTTCACCATTCTTCGCCATTGTCAACGTCTTTGTGGGCTATGCARTAATCGTCTATGCCGTCATCCCTATTGCTTATTGGGGCTTCAACGTGTATGGTGCAAATAAGTTCCCCATTTTCTCCTCCTCCTTGTTCACAGCACAGGGCCAAGAATACGATATACGCTCCATTGTAAATAACAAATTTGAATTGGATGTTGAAAAGTATCTCAAGARGGGTCCAATTCATCTTAGCGTCTTCTTTTCTCTTACTTACGGTTTTGGATTTGCCACCATTGCCGCCACCATTACCCATGTCATTTGCTTCTACGGAAWGGAGATTATGGAGCGGTATCGTGCTTCAAGCAAAGGCAAAGAAGATATCCACACGAAACTGATGAAGAAATACAAAGACATACCATCTTGGTGGTTTTATGTGATGCTCATCATTACTGCCACCACAAACCAGACACCCGGGTTGAATATCATTACTGAGTATATCTTTGGACTCATTTACCCCGGAAGACCAATAGCAAATGTGTGCTTCAAAACATACGGTTACATAAGCATGTCTCAAGCAGTCTCCTTCCTTAGTGATTTCAAGCTTGGCCACTACATGAAAATCCCTCCGAGATCAATGTTCTTAGTTCAGTTCATTGGAACAGTTCTTGCTGGAACCATCAACATTGGTGTGGCATGGTGGTTGCTAACTTCTGTTGAGAACATATGTCACAAGGATCTACTTCCCAAAGACAGTCCCTGGACATGTCCCGGTGACAAGGTTTTCTTTGATGCATCAGTTATTTGGGGTCTAGTTGGACCTAAGAAGATATTCGGTTCCAAAGCAGAATACTTTGCAATGAATTGGTTCTTCCTTGGAGGTGCAATTGGCCCCGTCATAGTTTGGTTATTGCACAAGGCATTCCCCAAGCAGTCATGGATTCCCTTGATCAACCTCCCAGTTCTCCTTGGGGCAACGGGGATGATGCCACCYGCCACGCCAGTWAACTACAATGCATGGGTTTTMGTTGGAACGGTGTTCAACTTCTTTGTGTTCCGTTACAGGAAGAAGTGGTGGCAGAGGTACAACTATGTTCTATCAGCAGCGCTTGATGCRGGGGTTGCCTTTATGACTGTGCTGCTTTACTTTGCTCTCAACATGGAGAATAGGAAATTGGATTGGTGGGGAACTGGTGGGGAGCACTGTGACTTGGCAATTTGTCCCACTGCTAAGGGCATAGTCGTTGATGGTTGCCCTGTCTTTTAA 2115 0.4837 MASETMKNVKTDPEMSKSDKELKQDEEEVSPIEEVRLTVANTDDPTQPVWTFRMWFLGLISCCLLSFLNQFFAYRAEPLVITQITVQVATLPIGRFMARVLPTTKFGIGSKKFSLNPGPFNMKEHVLITIFANAGTAFGSGSPYAVGIVNIIKAFYGRSISFVVAWLLIITTQVLGYGWAGLLRKYVVEPAHMWWPGNLVQVSLFRALHEKEDGRRISRAKFFFIALLCSFSWAVLPGYLLQTLTSISWLCWVFSKSVTAQQIGSGMNGLGLGALTLDWSAVASFLFSPLVSPFFAIVNVFVGYAXIVYAVIPIAYWGFNVYGANKFPIFSSSLFTAQGQEYDIRSIVNNKFELDVEKYLKXGPIHLSVFFSLTYGFGFATIAATITHVICFYGXEIMERYRASSKGKEDIHTKLMKKYKDIPSWWFYVMLIITATTNQTPGLNIITEYIFGLIYPGRPIANVCFKTYGYISMSQAVSFLSDFKLGHYMKIPPRSMFLVQFIGTVLAGTINIGVAWWLLTSVENICHKDLLPKDSPWTCPGDKVFFDASVIWGLVGPKKIFGSKAEYFAMNWFFLGGAIGPVIVWLLHKAFPKQSWIPLINLPVLLGATGMMPPATPVNYNAWVXVGTVFNFFVFRYRKKWWQRYNYVLSAALDAGVAFMTVLLYFALNMENRKLDWWGTGGEHCDLAICPTAKGIVVDGCPVF* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g3999 704 Pfam OPT oligopeptide transporter protein 430 667 IPR004813 GO:0035673
Amo13g3999 704 Pfam OPT oligopeptide transporter protein 50 434 IPR004813 GO:0035673
Amo13g3999 704 PANTHER ISP4 LIKE PROTEIN 432 703 IPR004648 GO:0055085
Amo13g3999 704 MobiDBLite consensus disorder prediction 10 27 - -
Amo13g3999 704 PANTHER OLIGOPEPTIDE TRANSPORTER 4 23 434 - -
Amo13g3999 704 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 33 433 IPR004813 GO:0035673
Amo13g3999 704 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 430 669 IPR004813 GO:0035673
Amo13g3999 704 MobiDBLite consensus disorder prediction 1 27 - -
Amo13g3999 704 PANTHER OLIGOPEPTIDE TRANSPORTER 4 432 703 - -
Amo13g3999 704 PANTHER ISP4 LIKE PROTEIN 23 434 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g3999 Amo-Chr13 132699736 132703269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g3999 25 703 Organic Solute Cotransporters AT5G64410 74.515 0.0 1125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g3999 - - ahf:112714781 1215.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g3999 13 132699736 132703269 Amo20g0459 20 5700981 5707180 PCT