Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo20g0284 ATGTCCACCGCCCAACTGCAAAACGACTTCTCTTCAGCTCAACCCTCATCATCTTCTAGACCCGCAGCCGATCAACATCACCACCCCCAGCCGCCTCAACACGCGTCTTCTGCAACCGTGGCGGCTCCTTTGAGCCGCTACGAGTCACAAAAGAAGCGAGACTGGAACACGTTCGGGCAGTATCTGAAGAATCAGACACCGCCGGTGTCCCTGTCTCAGTGCAATTTCAACCACGTGCTCGAATTCCTCCGTTACCTTGACCAATTTGGCAAGACTAAGGTTCACATGAACGGTTGCATCTTTTTTGGGCAGCCTGACCCTCCGGCCCCGTGCACCTGCCCTCTCAGGCAGGCGTGGGGTAGCCTAGACGCCCTCATAGGGCGTCTGAGAGCTGCCTACGAGGAGCACGGAGGCTCCCCGGAGTCRAACCCCTTCGGAAGCGGAGCTATTAGGGTGTACCTTCGTGAGGTGAAGGAGTGCCAGGCAAAGGCAAGAGGGATCCCTTACACCAAGAAGAAGAAGAAGAGGAGCAGCCAGATTAAGGGGATTAGCAATCACGACACTACTGCCTCAAAGTCTTTGAAGCAATTGGCTTCTTGA 600 0.5517 MSTAQLQNDFSSAQPSSSSRPAADQHHHPQPPQHASSATVAAPLSRYESQKKRDWNTFGQYLKNQTPPVSLSQCNFNHVLEFLRYLDQFGKTKVHMNGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPESNPFGSGAIRVYLREVKECQAKARGIPYTKKKKKRSSQIKGISNHDTTASKSLKQLAS* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo20g0284 199 MobiDBLite consensus disorder prediction 1 46 - -
Amo20g0284 199 ProSiteProfiles ALOG domain profile. 46 173 IPR006936 -
Amo20g0284 199 MobiDBLite consensus disorder prediction 165 199 - -
Amo20g0284 199 Pfam ALOG domain 41 159 IPR006936 -
Amo20g0284 199 MobiDBLite consensus disorder prediction 1 44 - -
Amo20g0284 199 PANTHER PROTEIN G1-LIKE2 15 186 IPR040222 -
Amo20g0284 199 MobiDBLite consensus disorder prediction 182 199 - -
Amo20g0284 199 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 15 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo20g0284 Amo-Chr20 3955973 3957158 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo20g0284 - - gmx:100306082 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0284 20 3955973 3957158 Amo20g0284 20 3955973 3957158 ECH
Amo20g0284 20 3955973 3957158 Amo18g1744 18 36226791 36229866 ECH
Amo18g1744 18 36226791 36229866 Amo20g0284 20 3955973 3957158 ECH