Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo18g1744 ATGTCCACAAGCAAAGGGAAAGATATAGTAGAGGGATCGTCAAGATCTCCTACTCATGATGGTGGTGCTAGTGATGATCGGATTCAACCGCAACATCAGTTGCCGTTGAGCCGATATGAGTCCCAAAAGAAGAGGGATTGGAACACTTTCGGCCAATACCTTAGGAACCAACGGCCTCCAGTGCCGCTTTCTCAGTGCAACTCCAGCCATGTCCTTGAATTTCTAAGGTATTTAGATCAATTCGGAAAAACAAAGGTACACTCACAAGGTTGCTTGTTTTTCGGGCAGACCGAACCACCAGGACCTTGCACATGCCCTCTCAAACAAGCCTGGGGGAGCCTTGACGCTCTCATAGGCCGATTGAGAGCGGCATATGAGGAAAATGGAGGTCTACCCGAGACAAACCCATTTGCCAGTGGAGCCATAAGAGTTTACCTACGAGAGGTTAGGGACTCACAAGCCAAAGCAAGAGGAATCCCTTATAAGAAGAAAAAGAAGAAGAGAAATCTAATCAATAATAAGGCCAACGGTGACACCGCTACTACCTCAAGCTTACCAGCTTTGCAGTAA 570 0.4719 MSTSKGKDIVEGSSRSPTHDGGASDDRIQPQHQLPLSRYESQKKRDWNTFGQYLRNQRPPVPLSQCNSSHVLEFLRYLDQFGKTKVHSQGCLFFGQTEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRVYLREVRDSQAKARGIPYKKKKKKRNLINNKANGDTATTSSLPALQ* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo18g1744 189 Pfam ALOG domain 33 151 IPR006936 -
Amo18g1744 189 MobiDBLite consensus disorder prediction 1 41 - -
Amo18g1744 189 MobiDBLite consensus disorder prediction 161 189 - -
Amo18g1744 189 ProSiteProfiles ALOG domain profile. 38 165 IPR006936 -
Amo18g1744 189 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 180 - -
Amo18g1744 189 MobiDBLite consensus disorder prediction 173 189 - -
Amo18g1744 189 PANTHER PROTEIN G1-LIKE2 2 180 IPR040222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo18g1744 Amo-Chr18 36226791 36229866 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo18g1744 - - gmx:100806493 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo20g0284 20 3955973 3957158 Amo18g1744 18 36226791 36229866 ECH
Amo18g1744 18 36226791 36229866 Amo20g0284 20 3955973 3957158 ECH
Amo18g1744 18 36226791 36229866 Amo18g1744 18 36226791 36229866 ECH