Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4481 ATGGCCCAGTTTACCCCCTCAGGTAAATCTGGTGATTTGAAACAAGAAGATGACAAGAAAACAAGTGAACTAGTTGTTTGCTTGGGTGAACTGTTAATAGACTTTGTACCAACGGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTAGCAGTTGGCATCTCAAGGCTTGGTGGTTCATCTGCTTTCATAGGCAAGGTAGGAAAGGATGAATTCGGGTATATGTTATGTGATATTTTAAAGCAGAACTTTGTTGATACATCTGGCGTGCGGTTTGACTCTGAAGCTAGAACTGCATTAGCTTTTGTCACGCTTAGAGCCGATGGCGAGCGCGAGTTCTTGTTTTTCCGGAACCCTAGTGCTGATATGCTTCTTCATGAGTCAGAGATTGACAAAAATCTCATACAGAAGGCTAAAATATTCCATTATGGTTCCATTAGCTTGATTCATGATCCATGCAAGTCAGCTCATCTTGCCGCCTTGCGAATCGCTAAAGAATCTGGTTGTATTCTCTCATATGATCCAAATTTGAGATTGGCGCTATGGCCATCAGCTGAGGCTGCTCAGAAAGGCATAATGAGTGTATGGGACAAAGCTGATATCATAAAGATAAGCGAGGAGGAGATTACGTTTTTGACAGAGGGTGATGATCCTAACGATGATGATGTTGTATTAAAGAAGCTTTTTCACCCTAATCTCAAGCTATTAATTGTGACACAAGGTTCAGAGGGTTGTAGATATTACACCAAGAAATTCAAAGGCCGGGTGGCAGGTGTTAAAGTTAACCCCATTGACACAACTGGGGCCGGTGATGCATTTGTTAGTGGGATTCTCTACAACATAGCTTCAGATCAAAGCATTTTACAGGAGGAGGAGCAACTCCGGAAAGCGCTACGATTTGCCAACATATGTGGTGCCATCACTGTGACAAAGAGAGGTGCAATTCCCGCACTACCTAACAAAGAAGCTGTTGCGCAGTTCATGTTAGAAGCAACTACAATATAG 1038 0.4345 MAQFTPSGKSGDLKQEDDKKTSELVVCLGELLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGKDEFGYMLCDILKQNFVDTSGVRFDSEARTALAFVTLRADGEREFLFFRNPSADMLLHESEIDKNLIQKAKIFHYGSISLIHDPCKSAHLAALRIAKESGCILSYDPNLRLALWPSAEAAQKGIMSVWDKADIIKISEEEITFLTEGDDPNDDDVVLKKLFHPNLKLLIVTQGSEGCRYYTKKFKGRVAGVKVNPIDTTGAGDAFVSGILYNIASDQSILQEEEQLRKALRFANICGAITVTKRGAIPALPNKEAVAQFMLEATTI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4481 345 CDD bac_FRK 24 326 - -
Amo19g4481 345 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Amo19g4481 345 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Amo19g4481 345 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Amo19g4481 345 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Amo19g4481 345 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Amo19g4481 345 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Amo19g4481 345 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Amo19g4481 345 Gene3D - 20 344 IPR029056 -
Amo19g4481 345 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Amo19g4481 345 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4481 Amo-Chr19 161848755 161851224 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4481 K00847 - gmx:100818404 556.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4481 19 161848755 161851224 Amo19g4481 19 161848755 161851224 ECH
Amo19g4481 19 161848755 161851224 Amo09g2832 09 107450144 107452603 hybridization
Amo19g4481 19 161848755 161851224 Amo19g4481 19 161848755 161851224 PCT
Amo09g2832 09 107450144 107452603 Amo19g4481 19 161848755 161851224 PCT
Amo19g4481 19 161848755 161851224 Amo09g2832 09 107450144 107452603 PCT