Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2832 ATGGCCCAGTTTACCCCCTCAGGTAAATCTGGTGATTTGAAACAAGAAGATGACAAGAAAACAAGTGAACTAGTTGTTTGCTTGGGTGAACTRTTAATAGACTTTGTACCAACGGTGGGTGGAGTGTCACTAGCTGAAGCACCTGCTTTCAAGAAAGCTCCTGGTGGTGCTCCTGCCAATGTAGCAGTTGGCATCTCAAGGCTTGGTGGTTCATCTGCTTTCATAGGCAAGGTAGGAAAGGATGAATTCGGGTATATGTTATGTGATATTTTAAAGCAGAACTTTGTTGATACATCTGWCGTGCGGTTTGACTCTGAAGCTAGAACTGCATTAGCTTTTGTCACGCTTAGAGCCGATGGCGAGCGCGAGTTCTTGTTTTTCCGGAACCCTAGTGCTGATATGCTTCTTCATGAGTCAGAGATTGACAAAATTCTCATACAGAAGGCTAAAATATTCCATTATGGTTCCATTAGCTTGATTCATGATCCATGCAAGTCAGCTCATCTTGCCGCGTTGCGAATCGCTAAAGAATCTGGTTGTATTCTCTCATATGATCCAAATTTGAGATTGGCACTATGGCCATCAGCTGAGGCTGCTCAGAAAGGTATAATGAGTGTATGGGACAAAGCTGATATCATAAAGATAAGCGAGGAGGAGATTACRTTTTTGACMRAGGGTGATGAYCCTAACGATGATGATGTTGTATTAAAGAAGCTTTTTCACCCTRATCTCAAGCTATTAATTGTGACACAAGGYTCAGAGGGTTGTAGATATTACACCAAGAAATTCAAAGGCCGGGTGGCAGGTGTTAAAGTTAACCCCATTGACACAACTGGGGCCGGTGATGCATTTGTTAGYGGGATTCTCTACAACATAGCTTCAGATCAAAGCATTTTACAGGAGGAGGAGCAACTCCGGAAAGCGCTACGATTTGCCAACATATGTGGTGCCATCACTGTGACAAAGAGAGGTGCAATTCCCGCACTACCTAACAAAGAAGCTGTTGCGCAGTTCATGTTAGAAGCAACSACM 1032 0.4302 MAQFTPSGKSGDLKQEDDKKTSELVVCLGELLIDFVPTVGGVSLAEAPAFKKAPGGAPANVAVGISRLGGSSAFIGKVGKDEFGYMLCDILKQNFVDTSXVRFDSEARTALAFVTLRADGEREFLFFRNPSADMLLHESEIDKILIQKAKIFHYGSISLIHDPCKSAHLAALRIAKESGCILSYDPNLRLALWPSAEAAQKGIMSVWDKADIIKISEEEITFLTXGDDPNDDDVVLKKLFHPXLKLLIVTQGSEGCRYYTKKFKGRVAGVKVNPIDTTGAGDAFVSGILYNIASDQSILQEEEQLRKALRFANICGAITVTKRGAIPALPNKEAVAQFMLEATT 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2832 344 PANTHER HEXOKINASE FAMILY MEMBER 16 341 - -
Amo09g2832 344 CDD bac_FRK 24 326 - -
Amo09g2832 344 PANTHER FRUCTOKINASE-7-RELATED 16 341 - -
Amo09g2832 344 Pfam pfkB family carbohydrate kinase 23 331 IPR011611 -
Amo09g2832 344 Gene3D - 20 344 IPR029056 -
Amo09g2832 344 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 276 289 IPR002173 GO:0016773
Amo09g2832 344 PRINTS Ribokinase signature 205 220 IPR002139 GO:0016301
Amo09g2832 344 PRINTS Ribokinase signature 50 69 IPR002139 GO:0016301
Amo09g2832 344 PRINTS Ribokinase signature 247 258 IPR002139 GO:0016301
Amo09g2832 344 SUPERFAMILY Ribokinase-like 25 339 IPR029056 -
Amo09g2832 344 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 55 79 IPR002173 GO:0016773
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2832 Amo-Chr9 107450144 107452603 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2832 K00847 - gmx:100818404 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4481 19 161848755 161851224 Amo09g2832 09 107450144 107452603 hybridization
Amo09g2832 09 107450144 107452603 Amo19g4481 19 161848755 161851224 PCT
Amo19g4481 19 161848755 161851224 Amo09g2832 09 107450144 107452603 PCT