Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g4474 ATGCCTTCACTTGGCAAAAATGAGATCTCACAAACATGCCCTCATGGCTATGGATGTTGTCCTACCTCATTGTTCAACTCATCATCACCATCACCACTGCCATCTCAAAAGATAACAACATCAACAACAGCAACAAGCAAACCGAGAAACAGCTCTTCAGAGTGCCGTCACAGTTTTGCAGCAACAACAACATCTTCCATCTTTCCAAACACAAAGTTCACTAACCATGAGTCTCTTCCATCTCTGCAAGAATCATTAGGTGAATTCAACAGAGTTTACCCTCAATACTCAGAGACTGAGATAGTTGATCGTGTGAGAGCCAAGGAATACTACCATCTCTCTTTTTCCAACCACACTTGCCTTGATTACATTGGTATTGGCCTTTTCTCATATTACCAACGCCAACAACACCATGATGCTTCAAGAACCCAGGTTGCATCTTCTTCAACTCCTCAATCTCCACCCCAATATTCAGATATTCCCTTCTTTAGCATATCTTACAAGACTGGGAATCTGAAGACTCTATTGCTTCATGGAGGGAAGGAGTCAGAATTTGAGTCAGCAATGAGGAGGAGAATGATGAGGTTCCTTAACATTTCTGAGAATGATTACTTCATGGTTTTCACAGCAAACAGAACATCAGCTTTCAAGCTTGTGGCAGAATCATACCCTTTCCAATCAAGAAAGAAGCTTTTGACAGTTTATGACTATGAGAGTGAGGCAGTGGAAGCAATGATTAGTTGCTCAGAGAAAAGAGGAGCCACGGCTATGTCAGCAGAGTTCTCATGGCCAAGGCTCAGAATTCAATCAGAGAAACTGAGGAAGATGATTGTTAGCAAGAGGAAGAAAAAAGGAAGAGGGCTCTTTGTGTTCCCACTTCATTCAAGAGTAACAGGAGCAAGGTATCCTTATTTGTGGATGAGCATAGCACAAGAGAATGGATGGCATGTTTTGATTGATGCATGTGCCTTAGGGCCAAAGGACATGGATAGCTTTGGCCTCTCTCTCTTTAGGCCAGACTTTCTTGTTTGTTCTTTCTACAAGGTCTTTGGAGACAATCCAACTGGCTATGGTTGTCTTTTTGTCAAGAAATCTGCTATTTCCATTCTTGAACCTTCCACTTGTGCTGGAATTGTGAACCTTGTACCGGAAAGGAGGTTACTTCAGCAGCTATCAGAGGATTCTTCAGTTGAACAAAAACCAACATCTATCTTACAAGATCAAGAGTTATCTTCTTTGACTTCCTTCTCTGGTAGGATAGAAACCACACAATCTACAAAAGTTGAAGCAGAAGAACCATCCGAGCTTCAGATAACAGAGGTACCTATAGAAGTAAAAGCTCAGGAAGAAGCAGTTGAGATACTTGAGAATAAGAATGTTAGAGACAGTGAAAATGGGAGCTTTAAAATTGAATGCAGGTGTTTGGATCAGGTGGATTCTTTAGGATTGGTTCTAATCACTAACAGGACAAGGTACCTGATAAATTGGTTGGTAAACTCAATGTTGAAGCTTAAGCACCCCAACACACAAGGAGGGGTTCCCCTGGTCAAGATTTATGGCCCAAAGATAAAATTTGATAGGGGACCTGCTTTGGCTTTCAATGTGTTTGATTGGAAAGGTGAAAAGATTGAGCCAGTCCTTGTGCAAAAGCTTGCTGATAGAAGCAATATATCTCTGAGCTATGGATTCCTTCATCATATCTGGTTTGCAGATAAATATGCAGAAGAGAAGGGAAGAGTACTACAGACCAAAGAAGGAAGAAGCCAAGGAGTGAATGCTTCCAACAAGAAGAAAGACAGAGACAACTTAGGAGTAACTGTGGTTACTGCTGCATTGAGCTTCTTGGCTAATTTTGAAGACATGTACAAACTCTGGGCTTTTGTTGCTAAGTTCCTTGATGCAGATTTTGTGGAAAAGGAGAGATGGAGATACACATCTCTCAATCAGAAAACCGTTCAAGTTCTAATTCCATAA 1974 0.4119 MPSLGKNEISQTCPHGYGCCPTSLFNSSSPSPLPSQKITTSTTATSKPRNSSSECRHSFAATTTSSIFPNTKFTNHESLPSLQESLGEFNRVYPQYSETEIVDRVRAKEYYHLSFSNHTCLDYIGIGLFSYYQRQQHHDASRTQVASSSTPQSPPQYSDIPFFSISYKTGNLKTLLLHGGKESEFESAMRRRMMRFLNISENDYFMVFTANRTSAFKLVAESYPFQSRKKLLTVYDYESEAVEAMISCSEKRGATAMSAEFSWPRLRIQSEKLRKMIVSKRKKKGRGLFVFPLHSRVTGARYPYLWMSIAQENGWHVLIDACALGPKDMDSFGLSLFRPDFLVCSFYKVFGDNPTGYGCLFVKKSAISILEPSTCAGIVNLVPERRLLQQLSEDSSVEQKPTSILQDQELSSLTSFSGRIETTQSTKVEAEEPSELQITEVPIEVKAQEEAVEILENKNVRDSENGSFKIECRCLDQVDSLGLVLITNRTRYLINWLVNSMLKLKHPNTQGGVPLVKIYGPKIKFDRGPALAFNVFDWKGEKIEPVLVQKLADRSNISLSYGFLHHIWFADKYAEEKGRVLQTKEGRSQGVNASNKKKDRDNLGVTVVTAALSFLANFEDMYKLWAFVAKFLDADFVEKERWRYTSLNQKTVQVLIP* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g4474 657 Coils Coil 445 465 - -
Amo19g4474 657 Pfam Aminotransferase class-V 188 378 IPR000192 -
Amo19g4474 657 SUPERFAMILY PLP-dependent transferases 183 379 IPR015424 -
Amo19g4474 657 Gene3D - 176 398 IPR015421 GO:0003824
Amo19g4474 657 MobiDBLite consensus disorder prediction 28 56 - -
Amo19g4474 657 PANTHER MOLYBDENUM COFACTOR SULFURASE 13 654 - -
Amo19g4474 657 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 13 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g4474 Amo-Chr19 161793316 161795946 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g4474 - - gmx:100820534 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4474 19 161793316 161795946 Amo19g4474 19 161793316 161795946 ECH
Amo19g4474 19 161793316 161795946 Amo09g2839 09 107503712 107506141 hybridization
Amo19g4474 19 161793316 161795946 Amo19g4474 19 161793316 161795946 PCT
Amo09g2839 09 107503712 107506141 Amo19g4474 19 161793316 161795946 PCT
Amo19g4474 19 161793316 161795946 Amo09g2839 09 107503712 107506141 PCT