Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g2839 ATGCCTTCACTTGGCAAAAATGAGATCTCACAAACATGCCCTCATGGCTATGGATGTTGTCCTACCTCATTGTTCAACTCATCATCACCATCACCACTGCCATCTCAAAAGATAACAACATCAACAACAGCAACAAGCAAACCGAGAAACAGCTCTTCAGAGTGCCGYCACAGTTTTGCAGCAACAACAACATCTTCCATCTTTCCAAACACAAAGTTCACTAACCATGAGTCTCTTCCATCTCTGCAAGAATCATTAGGTGAATTCAACAGAGTTTACCCTCAATACTCAGAGACTGAGATAGTTGATCGTGTGAGAGCCAAGGAATACTACCATCTCTCTTTTTCCAACCACACTTGCCTTGATTACATTGGTATTGGCCTTTTCTCATATTACCAACGCCAACAACACCATGATGCTTCAAGAACCCARGTTGCATCTTCTTCAACTCCTCAATCTCCACCCCAATATTCAGATATTCCCTTCTTTAGCATATCTTACAAGACTGGGAATCTGAAGACTCTATTGCTTCATGGAGGGAAGGAGTCAGAATTTGAGTCAGCAATGAGGAGGAGAATGATGAGGTTCCTTAACATTTCTGAGAATGATTACTTCATGGTTTTCACAGCAAACAGAACATCAGCTTTCAAGCTTGTGGCAGAATCATACCCTTTCCAATCAAGAAAGAAGCTTTTGACAGTTTATGACTATGAGAGTGAGGCAGTGGAAGCAATGATTAGTTGCTCAGAGAARAGAGGAGCCACRGCTATGTCAGCAGAGTTCTCATGGCCAAGGCTCAGAATTCAATCAGAGAAACTGAGGAAGATGATTGTTAGCAAGAGGAAGAAAAAAGGAAGAGGGCTCTTTGTGTTCCCACTTCATTCAAGAGTAACAGGAGCAAGGTATCCTTATCTGTGGATGAGCATAGCACAAGAGAATGGATGGCATGTTTTGATTGATGCATGTGCCTTAGGGCCAAAGGACATGGATAGCTTTGGCCTCTCTCTCTTTAGGCCAGACTTTCTTGTTTGTTCTTTCTACAAGGTCTTTGGAGACAATCCAACTGGCTATGGTTGTCTTTTTGTCAAGAAATCTGCTATTTCCATTCTTGAACCTTCCACTTGTGCTGGAATTGTGAACCTTGTACCGGAAAGGAGGTTACTTCAGCAGCTATCAGAGGATTCTTCAGTTGAACAAAAACCAACATCTATCTTACAAGATCAAGAGTTATCTTCTTTGACTTCCTTCTCTGGTAGGATAGAAACCACACAATCTACAAAAGTTGAAGCAGAAGAACCATCCGAGCTTCAGATAACAGAGGTACCTATAGAAGTAAAAGCTCAGGAAGAAGCAGTTGAGATACTTGAGAATAAGAATGTTAGAGACAGTGAAAATGGGAGCTTTAAAATTGAATGCAGGTGTTTGGATCAGGTGGATTCTTTAGGATTGGTTCTAATCACTAACAGGACAAGGTACCTGATAAATTGGTTGGTAAACTCAATGTTGAAGCTTAAGCACCCCAACACACAAGGAGGGGTTCCCCTGGTMAAGATTTATGGCCCAAAGATAAAATTTGATAGGGGACCTGCTTTGGCTTTCAATGTGTTTGATTGGAAAGGTGAAAAGATTGAGCCAGTCCTTGTGCAAAAGCTTGCTGATAGAAGCAATATATCTCTGAGCTATGGATTCCTTCATCATATCTGGTTTGCAGATAAATATGCAGAAGAGAAGGGAAGAGTACTACAGACCAAAGAAGGAAGAAGCCAAGGAGTGAATGCTTCCAACAAGAAGAAAGACAGAGACAACTTAGGAGTAACTGTGGTTACTGCTGCATTGAGCTTCTTGGCTAATTTTGAAGACATGTACAAACTCTGGGCTTTTGTTGCTAAGTTCCTTGATGCAGATTTTGTGGAAAAGGAGAGATGGAGATACACATCTCTCAATCAGAAAACCGTTCAAGTTCTAATTCCATAA 1974 0.4108 MPSLGKNEISQTCPHGYGCCPTSLFNSSSPSPLPSQKITTSTTATSKPRNSSSECRHSFAATTTSSIFPNTKFTNHESLPSLQESLGEFNRVYPQYSETEIVDRVRAKEYYHLSFSNHTCLDYIGIGLFSYYQRQQHHDASRTQVASSSTPQSPPQYSDIPFFSISYKTGNLKTLLLHGGKESEFESAMRRRMMRFLNISENDYFMVFTANRTSAFKLVAESYPFQSRKKLLTVYDYESEAVEAMISCSEKRGATAMSAEFSWPRLRIQSEKLRKMIVSKRKKKGRGLFVFPLHSRVTGARYPYLWMSIAQENGWHVLIDACALGPKDMDSFGLSLFRPDFLVCSFYKVFGDNPTGYGCLFVKKSAISILEPSTCAGIVNLVPERRLLQQLSEDSSVEQKPTSILQDQELSSLTSFSGRIETTQSTKVEAEEPSELQITEVPIEVKAQEEAVEILENKNVRDSENGSFKIECRCLDQVDSLGLVLITNRTRYLINWLVNSMLKLKHPNTQGGVPLVKIYGPKIKFDRGPALAFNVFDWKGEKIEPVLVQKLADRSNISLSYGFLHHIWFADKYAEEKGRVLQTKEGRSQGVNASNKKKDRDNLGVTVVTAALSFLANFEDMYKLWAFVAKFLDADFVEKERWRYTSLNQKTVQVLIP* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g2839 657 Coils Coil 445 465 - -
Amo09g2839 657 Pfam Aminotransferase class-V 188 378 IPR000192 -
Amo09g2839 657 SUPERFAMILY PLP-dependent transferases 183 379 IPR015424 -
Amo09g2839 657 Gene3D - 176 398 IPR015421 GO:0003824
Amo09g2839 657 MobiDBLite consensus disorder prediction 28 56 - -
Amo09g2839 657 PANTHER MOLYBDENUM COFACTOR SULFURASE 13 654 - -
Amo09g2839 657 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 13 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g2839 Amo-Chr9 107503712 107506141 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g2839 - - gmx:100820534 1031.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g4474 19 161793316 161795946 Amo09g2839 09 107503712 107506141 hybridization
Amo09g2839 09 107503712 107506141 Amo19g4474 19 161793316 161795946 PCT
Amo19g4474 19 161793316 161795946 Amo09g2839 09 107503712 107506141 PCT