Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1422 ATGAACACAATTGCCATCATTCGCAATTCTGCTACCAAATCCTCTCGCAGGGTTCTCATTGGTTCTTCTACGACTTCATCTTCTTTGGCTTCCCCTCATCCAAAATGTCACCGCACTCTTCTCACCACTGCGAACCATTTCCGAATTGGTAGTGCCAAGAATTTTCTTTACTTACCGTTTTCGAGTCTTTTCCATTTCAGGATTAATTCATGGCAATTAGGATTAGTAATCAAACCAGATGAGGATTTTTCAAGCATTGCCAGAGTTGCATACTCATTGAGTGTTCGGAATTTCTCAACTTCAGTTGAAAACCGCGTAAATAACACCAATTTCGAGAGGATTTATGTGCAGGGTGGCGTGAATTTGAAGCCACATGTGGTGGAGAGAGTTGATGAGGAAGAGAAGAGTGTTCCCACCATAGAGAAGAATTCGGAGGGTTTTGTGAGTGTGAGTGTGGTGGAAAAGGCGAGAGTTGAGGACAGTGAAGCGGAGAGAGAAGCATGGAGGCTATTGAAGGGTGCTGTTGTGAGTTATTGTGGGAACCCTGTGGGGACTGTGGCTGCTAATGATCCTGGTGACAAGACGCCATTGAATTACGATCAGGTCTTCATTCGGGATTTCGTTCCTTCTGCTCTCGCTTTCTTGCTTGGAGGCGAAAGCGAGATTGTCAAGAACTTTCTTCTTCATACCTTGCAATTGCAGAGTTGGGAGAAAACAGTAGATTGCTACAGTCCAGGGCAGGGCTTGATGCCTGCTAGTTTCAAAGTTAGAACTGTAGCTCTTGATGGAGATAATCTTGAAGAAGTTTTAGACCCTGATTTCGGGGAATCAGCAATTGGTCGTGTTGCACCTGTAGATTCAGGACTGTGGTGGATCATCTTGTTGCGGGCTTATGGGAAGCTCACTGGTGACTATAGCTTGCAAGAAAGGGTGGATGTTCAGACTGGCTTAAAAATGATCCTTAACTTGTGTTTAACTGATGGTTTCGATATGTTTCCTTCTCTCCTAGTCACTGATGGATCTTGTATGATAGACAGGCGGATGGGGATTCATGGCCACCCCCTTGAGATCCAAGCCTTATTTTACTCAGCTCTTCGCTGCTCCCGTGAGATGCTCGCTGCAAATGAGGGAAGCTCTAATCTGATTAGAGCCATTAACAATCGACTCAGCGCACTGTCATTCCACATTAGAGAATATTATTGGGTGGATATGAAAAAGATCAACGAAATATATAGGTACAAAACCGAAGAGTACTCCATGGATGCAACCAACAAGTTCAACATCTATCCAGAACAAATTCCATTGTGGTTAATGGATTGGATTCCAGAAGAAGGTGGATATCTGATTGGGAATCTGCAGCCAGCTCACATGGATTTCAGGTTTTTCACGCTTGGAAATCTTTGGTCTATTGTTTCATCTTTGGGTACCCCTAGACAGAATGAAGCTATTTTGAATCTGATAGAAGCAAAGTGGGATGATCTTGGCAGTCATATGCCTCTTAAGATATGCTATCCTGCGTTGGATAATGAAGAGTGGCGGATAATAACTGGCAGTGACCCTAAGAACACTCCTTGGTCATATCACAACGGTGGATCTTGGCCAACTCTTCTGTGGCAGTTCACTTTGGCATGCATCAAAATGGGGAGAATCGAGCTAGCCAAGAAGGCTGTCGCATTGGCCGAGAAAAGGCTTCCCATTGATTTGTGGCCAGAATACTATGATACACGAACTGGAAAATTTATTGGAAAACAATCACGGCTGTATCAAACATGGACAATCTCCGGGTTCCTTACATCTAAGATGCTTTTGAAGAAGCCTGAGATGGCATCGATGTTATTCTGGGAGGAGGATTATGAACTACTTGAGATATGTGTTTGTGCACTAAATAAGAGTGGAAGGAGGAAATGCTCCCGTGGTGCTGCCAGGTCACAGATTCTTGTGTGA 1944 0.4408 MNTIAIIRNSATKSSRRVLIGSSTTSSSLASPHPKCHRTLLTTANHFRIGSAKNFLYLPFSSLFHFRINSWQLGLVIKPDEDFSSIARVAYSLSVRNFSTSVENRVNNTNFERIYVQGGVNLKPHVVERVDEEEKSVPTIEKNSEGFVSVSVVEKARVEDSEAEREAWRLLKGAVVSYCGNPVGTVAANDPGDKTPLNYDQVFIRDFVPSALAFLLGGESEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVRTVALDGDNLEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYSLQERVDVQTGLKMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRCSREMLAANEGSSNLIRAINNRLSALSFHIREYYWVDMKKINEIYRYKTEEYSMDATNKFNIYPEQIPLWLMDWIPEEGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLGTPRQNEAILNLIEAKWDDLGSHMPLKICYPALDNEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRIELAKKAVALAEKRLPIDLWPEYYDTRTGKFIGKQSRLYQTWTISGFLTSKMLLKKPEMASMLFWEEDYELLEICVCALNKSGRRKCSRGAARSQILV* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1422 647 Pfam Alkaline and neutral invertase 167 606 IPR024746 GO:0033926
Amo19g1422 647 PANTHER - 80 647 IPR024746 GO:0033926
Amo19g1422 647 Gene3D - 198 598 IPR012341 GO:0005975
Amo19g1422 647 SUPERFAMILY Six-hairpin glycosidases 167 598 IPR008928 GO:0005975
Amo19g1422 647 PANTHER ALKALINE/NEUTRAL INVERTASE A, MITOCHONDRIAL 80 647 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1422 Amo-Chr19 31233870 31237896 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1422 - - gmx:100785091 1014.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0406 16 6559719 6562192 Amo19g1422 19 31233870 31237896 ECH
Amo19g1422 19 31233870 31237896 Amo19g1422 19 31233870 31237896 ECH