Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0406 ATGATCGGTACGAACCTTATTAGCATTTGCAGCATGAAACCATCTCCGAGGATGCTCATTAGTTGCAAGAATTCTTCATCGTTTCTTGCAAGATGTCACCCCACTACTCCTCGTGCAATGTCTAATAACCTTTCTTCTACCAACAACATTCACTACCCTCTTCGCATGTTGGGTTTTGCACGAATAATGAACGGTAACCACAGAGCTTTTCGGTTACCCTCTTCAAGATATTTTAGCCATTTAACTTCAAGGCCTCAAACATTCCGTTCACCGGCCGCAACCAGAATCAACGGCGACGTCACCACTGCTACCGTGAATGAACTTGGATTGAAGCCTCGGAAGTCAAGTGCGAATGACAAAAAGAATCTGGAGATTGAGAAGGTTTACATAAAGACGGACAATGGCATCGATGAGAAGCAATTGGTTGTCGAAAAATCAGCGGACAAAGAGTCCGAGTTAGAAGCTGGGGGTGAAGAAGATAATCCAAGATCAGAGAATAAGGTATCTGAGGGTGTGGCTGCTCCAATTATCAACAACAATGGTGAGGAGGAGACAGACGTGGAAAGAGAGGCATGGAAGCTGTTGCAAGAGGCACTTGTTACGTATTGTGACACCCCTGTGGGAACGGTGGCTGCAAATGATTCCAGTGAGGAGTCTTTGAATTATGATCAGGTCTTCATTCGGGATTTCATCCCTTCAGCCCTTGCTTTCTTGCTCAAGGGGGAAAATGAAATCGTCAAGAACTTTCTCCTTCATACCTTGCAACTCCAGAGTTGGGAGAAAACTGTGGACTGCTATAGCCCAGGGCAGGGGTTGATGCCTGCGAGCTTCAAAGTTAAAACCATGCAAGTTGATGAAGAAAAGGTAGAAGAAGTTTTGGATCCTGACTTTGGGGAATCAGCTATTGGTCGTGTTGCGCCGGTAGATTCAGGATTGTGGTGGATCATTTTGCTGAGGGCTTATGGGAAGCTTACCGGTGATTACAGCTTGCAAGAAAGGGTGGATGTTCAGACAGGCTTAGAGATGATCCTTAACTTGTGTTTAACCGATGGCTTTGATATGTTCCCATCTCTGTTGGTGACTGATGGTTCTTGCATGATAGATAGGAGGATGGGAATTCATGGTCACCCTCTTGAGATTCAAGCGTTGTTTTACTCAGCTCTACGATCAGCCCGTGAGATGGTTAAGGTGGATGATGGATCCAAGAATCTGGTTAGAGAAATCAACAACAGGCTGAGTGCACTCTCATTCCACATTAGAGAATACTATTGGTTGGATATGAAAAAGATGAACGAGATATACCGGTACAAAACAGAAGAGTATTCGTTGGATGCCACCAACAAGTTCAACATATATCCAGAACAGATTCCTCTGTGGCTAATGGATTGGGTTCCACAGGAAGGGGGATATCTCATTGGAAACCTTCAACCGGCACACATGGATTTCAGATTCTTCATGCTTGGGAACCTCTGGTCCATTGTTTCATCTTTGGGTACCCCAAAACAGAATAAGTCCATTCTGAATCTCATAGAAGCAAAATGGGATGATCTTGTTGGTCACATGCCTCTTAAGATATGCTATCCTGCCTTGGAGTCTGAGGAATGGCGCATAATCACTGGCAGTGACCCAAAGAATACCCCTTGGTCATATCACAATGGTGGATCTTGGCCAACACTTCTATGGCAGTTTACACTTGCATGCATCAAAATGGGGAGAACTGAACTTGCTGAGGATGCAGTTGCTTTGGCTGAGAAAAGGCTTCCAGTTGATTCATGGCCGGAATACTATGACACTCGCACCGGCAAGTTCATCGGGAAACAGGCCCGGCTTTATCAGACATGGACATTAGCCGGCTTCCTTGCATCCAAGATGTTCTTAAAGAATCCTGAGACAGCAGCCATGTTGTGCTGGGAAGAGGACCTTGAGATTCTTGAGACATGTGCTTGTGCACTGAGCAAGAGTGGCAGGGCTAAATGCTCTCGCGATGCCGCCAAGTCTCAGATTCTTGTTTAG 2013 0.455 MIGTNLISICSMKPSPRMLISCKNSSSFLARCHPTTPRAMSNNLSSTNNIHYPLRMLGFARIMNGNHRAFRLPSSRYFSHLTSRPQTFRSPAATRINGDVTTATVNELGLKPRKSSANDKKNLEIEKVYIKTDNGIDEKQLVVEKSADKESELEAGGEEDNPRSENKVSEGVAAPIINNNGEEETDVEREAWKLLQEALVTYCDTPVGTVAANDSSEESLNYDQVFIRDFIPSALAFLLKGENEIVKNFLLHTLQLQSWEKTVDCYSPGQGLMPASFKVKTMQVDEEKVEEVLDPDFGESAIGRVAPVDSGLWWIILLRAYGKLTGDYSLQERVDVQTGLEMILNLCLTDGFDMFPSLLVTDGSCMIDRRMGIHGHPLEIQALFYSALRSAREMVKVDDGSKNLVREINNRLSALSFHIREYYWLDMKKMNEIYRYKTEEYSLDATNKFNIYPEQIPLWLMDWVPQEGGYLIGNLQPAHMDFRFFMLGNLWSIVSSLGTPKQNKSILNLIEAKWDDLVGHMPLKICYPALESEEWRIITGSDPKNTPWSYHNGGSWPTLLWQFTLACIKMGRTELAEDAVALAEKRLPVDSWPEYYDTRTGKFIGKQARLYQTWTLAGFLASKMFLKNPETAAMLCWEEDLEILETCACALSKSGRAKCSRDAAKSQILV* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0406 670 PANTHER - 5 670 IPR024746 GO:0033926
Amo16g0406 670 MobiDBLite consensus disorder prediction 143 183 - -
Amo16g0406 670 Gene3D - 209 617 IPR012341 GO:0005975
Amo16g0406 670 MobiDBLite consensus disorder prediction 143 166 - -
Amo16g0406 670 SUPERFAMILY Six-hairpin glycosidases 191 621 IPR008928 GO:0005975
Amo16g0406 670 PANTHER ALKALINE/NEUTRAL INVERTASE 5 670 - -
Amo16g0406 670 Pfam Alkaline and neutral invertase 191 629 IPR024746 GO:0033926
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0406 Amo-Chr16 6559719 6562192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0406 - - gmx:100812691 980.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0406 16 6559719 6562192 Amo19g1422 19 31233870 31237896 ECH
Amo16g0406 16 6559719 6562192 Amo16g0406 16 6559719 6562192 ECH
Amo16g0406 16 6559719 6562192 Amo09g0861 09 15663953 15667988 PCT
Amo09g0861 09 15663953 15667988 Amo16g0406 16 6559719 6562192 PCT