Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g1370 ATGCGAGACAAAGAGGAAGCAAAAGCATGGGAGAAGAAGGGTGGATTCAGAGCTGCAATGTTTGTTTTCGTGTTGTCAGCATTGGACAACATGGGTCTGGTGGCGAACATGGTGAGCATGGTGCTCTACTTTTATGGCGTTATGCACTTTGATCTGTCAAGCTCTGCCAACACTCTGACAAACTTTTTGGGTTCCACTTTCTTGCTCTCACTCGTTGGTGCTTTCATCTCCGATACTTACCTCAACAGACTCACCACATGCTTGCTTTTTGGATCACTCGAAGTCACGGCGCTGGTAGTGGTGACAATTCAAGCGGGCACAAAGGCGCTACAACCAGAAGCATGTGGAAAATCAAGCTGCGTGAAAGGAGGAGTAGCAGTAATGTTGTACACGTCACTGTGCCTGCTGGCATTGGGATCGGGGGGAGTGAGGGGTTCCATGACGGCACTTGGGGCGGACCAGTTTGAAGAGAAGGACCCGAAGGAAGGGAAGGGTTTAGCCACCTACTTCAATTGGCTTCTGCTCAGCACAACGCTCGGCTCAGTTGTGGGCGTTACTGCCGTCGTCTGGGTTAGCACGCAGAGAGCATGGTACTTGGGATTCTTGATTGTAACCGTTTCTTCCTTCCTTGGATTTCTCACTCTTGCTCTTGGCAAACCCTTTTACAGAATTCTACCACCTTCTCAAAGCCCTCTTTCAAGGATCCTTCAGGTTATTGTTGTGGCTTTCAAGAACCGAAAGCTACCACTACCAGAATCCCATGAAGAACTATACGAGATTAGTGATAAAGACTCAACAACAGGGAAGATTGCACACACAAACCAGTTAAGGTTCCTAGACAAAGCAGCAGTTCTTCAAGGAAACTTTGAACCAAAACCGTGGAAAGTTTGCACTGTTACACAAGTTGAAGAAGTGAAGATCCTAACAAGAATGTTACCAATATTAGCTAGCACCATAATAATGAACACTTGCCTAGCACAGCTTCAAACATTCTCAGTTCAACAGGGGAATGTAATGAACCTAAAACTCGGCTCCTTCACCGTTCCCCCGGCATCAATTCCGGTGATACCCCTTCTCTTCTTATGCATCCTAATCCCAATTTACGAGTTCTTGTTCGTGCCATTCGCACGAAAGATCACAAACCATCCCTCTGGAGTCACTCAACTCCAGAGGGTTGGCGTTGGACTAGTACTCTCTTCGATTTCAATGATGGTAGCCGGAATCATAGAAGTGAAGAGAAGGGACCAAGCAAGAAAAGACCCTTCAAAACCAATTAGCCTATTCTGGCTTTCATTCCAATATGCGATTTTCGGGATTGCAGATATGTTCACACAAGTAGGCCTATTGGAATTCTTCTATAGAGAAGCACCAAAAACAATGAAATCGCTATCAACTTCTTTCACATGGCTAGCAATGTCCATTGGTTACTTCTTGAGCACGGTATTTGTTAATGTAATAAACAGCGTCACGAAGAGGGTGGCGCCGAGCAAACAAGGTTGGTTACATGGATTTGATCTGAACTCGAACAATCTCAACTTGTTTTATTGGTTCTTGGCCATCTTAAGTTGCATAAATTTCTTCAATTTCGTTTATTGGGCGTGTTGGTACAAGTACAAATCCGAACAAGAGTATCAAGATGGAGATCAAGAACCAAGGGCGAGGGCGAAATCCGAATCCGAATCCGAAACAAAGCATATGAAAATGGTTCACCAAGGAATGATGATGATGGGTAAAAGCAGCCAAACTAGTGAAGCCAATAGTGAGGGACCCTCTTCCTCTGATGAAACAGAAGATGGCCAAAGAGAAAGAAGCAAAGTATAG 1821 0.4503 MRDKEEAKAWEKKGGFRAAMFVFVLSALDNMGLVANMVSMVLYFYGVMHFDLSSSANTLTNFLGSTFLLSLVGAFISDTYLNRLTTCLLFGSLEVTALVVVTIQAGTKALQPEACGKSSCVKGGVAVMLYTSLCLLALGSGGVRGSMTALGADQFEEKDPKEGKGLATYFNWLLLSTTLGSVVGVTAVVWVSTQRAWYLGFLIVTVSSFLGFLTLALGKPFYRILPPSQSPLSRILQVIVVAFKNRKLPLPESHEELYEISDKDSTTGKIAHTNQLRFLDKAAVLQGNFEPKPWKVCTVTQVEEVKILTRMLPILASTIIMNTCLAQLQTFSVQQGNVMNLKLGSFTVPPASIPVIPLLFLCILIPIYEFLFVPFARKITNHPSGVTQLQRVGVGLVLSSISMMVAGIIEVKRRDQARKDPSKPISLFWLSFQYAIFGIADMFTQVGLLEFFYREAPKTMKSLSTSFTWLAMSIGYFLSTVFVNVINSVTKRVAPSKQGWLHGFDLNSNNLNLFYWFLAILSCINFFNFVYWACWYKYKSEQEYQDGDQEPRARAKSESESETKHMKMVHQGMMMMGKSSQTSEANSEGPSSSDETEDGQRERSKV* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g1370 606 MobiDBLite consensus disorder prediction 546 606 - -
Amo19g1370 606 PANTHER PEPTIDE/NITRATE TRANSPORTER 9 550 - -
Amo19g1370 606 MobiDBLite consensus disorder prediction 546 567 - -
Amo19g1370 606 Pfam POT family 86 499 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo19g1370 606 Gene3D MFS general substrate transporter like domains 1 545 IPR036259 -
Amo19g1370 606 MobiDBLite consensus disorder prediction 575 593 - -
Amo19g1370 606 SUPERFAMILY MFS general substrate transporter 4 546 IPR036259 -
Amo19g1370 606 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 9 550 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g1370 Amo-Chr19 28679149 28684487 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g1370 4 550 Organic Solute Cotransporters AT1G59740 40.388 6.24e-148 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g1370 K14638 - gmx:100817702 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g1370 19 28679149 28684487 Amo19g1370 19 28679149 28684487 ECH
Amo16g0737 16 11790371 11793280 Amo19g1370 19 28679149 28684487 PCT
Amo19g1370 19 28679149 28684487 Amo16g0737 16 11790371 11793280 PCT