Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g0737 ATGGCAGACCAAGAGGAAAAAGAAGAACAGAAGCTCCTAGCAGAATGGAAGAGAAAAAAAGGTGGATTCAGGGCTTCCATGTTCATCTTTGTGTTGTCAGCATTGGACAACATGGGATTTGTGGCAAACATGGTGAGCCTAGTGCTTTACTTTTATGGGGTGATGCACTTTGATCTGTCAAGTTCAGCCAACACTCTCACAAACTTCATGGGTTCAACTTTCTTGCTTTCCCTTGTTGGAGGCTTCATCTCAGACACATACTTAAACAGATTCAGCACATGCTTGCTTTTTGGATCCCTTGAAGTCATGGCATTGGCAATGCTGAGTGTTCAAGCTGGTTCAAGGCATTTACACCCAGAAGCATGTGGGAAATCAAGCTGTGTGAAAGGTGGTATAGCAGTGATGTTGTACACATCACTGTGCTTGTTGGCATTGGGAGTGGGAGGGGTTAGAGGCTCCATGACTGCATTTGGTGCTGACCAATTTGATGACAAGGATCCAAGTGAAGCAAAAGCTCTTGCAAGCTTCTTCAACTGGCTTCTAATGAGTTCAACTCTTGGAGCAATCACTGGTGTAACTGCTGTTGTTTGGGTCAGCACTCAGAAAGCATGGCACTGGGGATTCTTCATCATAACCATAGCTTCCTCCATTGGATTCATCACTCTTGCTATTGGAAAACCATTCTATAGAATCAAAACTCCTGGGGATAGCCCCATTTTGAGGATTCTTCAGGTTCTTGTTGTGGCTTTTAAGAACCGAAAGCTGTCACTGCCAGAATCACACCAAGAATTGTATGAGATCAGTGACAAAGATGCTGCTGTAGAGAAGATTGCACACACCAACCAGATTAGGTTCCTAGATAAAGCGGCGATTGTTTCAGAAAAGTCAAAGGCAGATAGATGGAAAGTGTGCACAGTAACACAGGTAGAAGAAGTGAAGATCCTAATAAGAATGCTACCAATAGTGGGAAGCACCATCATAATGAACACATGCTTGGCACAGCTTCAAACATTCTCAGTTCAGCAAGGCAATGTAATGAACCTCAAACTGGGTTCTCTAACAGTTCCAGCACCTTCCATTCCCGTTATACCCCTTGTCTTCATAACCATCTTGGTCCCCATTTACGAACTATTCTTCGTCCCATTCGCACGCAAGATCACAAACCACCCCTCAGGAATTACACAACTACAGAGAGTTGGCGTAGGCCTTGTTCTCTCTGCAATCTCAATGGCAGTGGCTGCAATTGTTGAGGTGAAAAGAAGGGAGAGAGGGAGAAAAGACCCTTCTAACCCCATAAGCCTGTTCTGGCTTTCGTTCCAGTACGCTATATTTGGTGTTGCGGACATGTTCACGCTTGTGGGACTGTTGGAATTCTTCTACAGAGAAGCTCCTTCGGGGATGAAATCGTTGTCAACATCGTTGACGTGGCTATCCATGTCTCTTGGATACTTTCTGAGCACGGTGTTTGTGAATCTCATAAATGGTGTTACGAAAAGAGTGAGTCCTAGTAAACAAGGGTGGTTGCATGGTTTTGACTTGAATCACAATAATCTCAACTTGTTTTATTGGTTCTTGGCCATTCTTAGCTGCATTAACTTCTTCAACTACATCTTCTGGGCCTCAAGGTACAAGTACAAATCTGATCAACTACACCCTCCTCCTCCTCCTGCTGCTGCTGCCACAAATCACAACAAGCCTTTAGATCAAGTTCCCCTCAGAAAAATGGAGATTAATTAG 1737 0.441 MADQEEKEEQKLLAEWKRKKGGFRASMFIFVLSALDNMGFVANMVSLVLYFYGVMHFDLSSSANTLTNFMGSTFLLSLVGGFISDTYLNRFSTCLLFGSLEVMALAMLSVQAGSRHLHPEACGKSSCVKGGIAVMLYTSLCLLALGVGGVRGSMTAFGADQFDDKDPSEAKALASFFNWLLMSSTLGAITGVTAVVWVSTQKAWHWGFFIITIASSIGFITLAIGKPFYRIKTPGDSPILRILQVLVVAFKNRKLSLPESHQELYEISDKDAAVEKIAHTNQIRFLDKAAIVSEKSKADRWKVCTVTQVEEVKILIRMLPIVGSTIIMNTCLAQLQTFSVQQGNVMNLKLGSLTVPAPSIPVIPLVFITILVPIYELFFVPFARKITNHPSGITQLQRVGVGLVLSAISMAVAAIVEVKRRERGRKDPSNPISLFWLSFQYAIFGVADMFTLVGLLEFFYREAPSGMKSLSTSLTWLSMSLGYFLSTVFVNLINGVTKRVSPSKQGWLHGFDLNHNNLNLFYWFLAILSCINFFNYIFWASRYKYKSDQLHPPPPPAAAATNHNKPLDQVPLRKMEIN* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g0737 578 Pfam POT family 92 506 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo16g0737 578 Gene3D MFS general substrate transporter like domains 3 551 IPR036259 -
Amo16g0737 578 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 10 556 IPR000109 GO:0016020|GO:0022857|GO:0055085
Amo16g0737 578 PANTHER PEPTIDE/NITRATE TRANSPORTER 10 556 - -
Amo16g0737 578 SUPERFAMILY MFS general substrate transporter 12 546 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g0737 Amo-Chr16 11790371 11793280 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g0737 1 547 Organic Solute Cotransporters AT1G69850 42.393 4.28e-153 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g0737 K14638 - aprc:113861407 973.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g0737 16 11790371 11793280 Amo16g0737 16 11790371 11793280 ECH
Amo16g0737 16 11790371 11793280 Amo19g1370 19 28679149 28684487 PCT
Amo19g1370 19 28679149 28684487 Amo16g0737 16 11790371 11793280 PCT