Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0830 ATGGTGTTTGTAAGGAGAAAACGAGTCACTGACCCGTTCGACGACGAAGCCAAAGCTCGCCTTGTTGGCGGCGATCACCGGAAATTGAGCTACGACAGCAGCGGGAGCGAACATTCCGGCACCGGCGATGGCGACGAGAACTCTCCGTGTCTCTCCGAGCTCGTGCATAATTTCCTGGAGGACAACGGAAACGAGGATGAGTCAGTAGGTGACGAGTTCGACTCGGAGCGAGTCGACTCAGTCTCCGAATGCATGGACTCGGTGGTGGAAGCGCTCATGTTAACCGCAACGAACAATGTGAGCGATCCTTACAGAGCGTTGCTCCACGCACACGTTCTTGAAGCCACTGAGAGGTTCGCGTTTATGAGGGAGCAAAACGCATCGTCGTTTCGACGAAGCGTGTTGTCGTTTTTGCGTGAGAGAGGGCACAATGCAGCGATATGCAAGACAAGGTGGGATTCTTCCTCCGGAGTGGTCACAGCGGGGAACTACGAGTTCATCGACGTGGTGCAATCTGGACCGTCCACGTGGCGGCAGAACAGGTACTTCGTGGATCTCGATTTCGCCGTTCAGTTTGAGATCGCAAGGGCTAGTAATAGTTACTCTGAAGTTCTGAGCAATGTTCCCAGAATATTCGTTGGGACAGCAGAAGAGCTGAAACGCACCGTTTTGGCGTTGTGCGAAGCTGCGAAACGGTGTTTCAGGAGCAAGGGGCTCTCGGTGCCACCTTGGAGAAAGAACCGGTTCATGCAGGAAAAGTGGTTCGGTCCGTATAGAAGGACGACGAATCCGGTTCATGGAAACCCGGTTCCCGCGGTTGTTGATGGAGTGACCGGTGCTAAATGCAGGTTCGTTGGATTCAACGACGCCGTTTTGGAAGCCAGACGCGGCGGTAACCCATGTTGGACTCGGAGAAACATGCAACTTTTGGATTTTTCTGATTTTGAAACTCGACACCGTTCATTTTGGACGGACAAAAGCGTGGGACCATTTGAGTCAATTGTGATTGGGATTGGATTTGGAATAACAGAGTTCTGA 1038 0.5241 MVFVRRKRVTDPFDDEAKARLVGGDHRKLSYDSSGSEHSGTGDGDENSPCLSELVHNFLEDNGNEDESVGDEFDSERVDSVSECMDSVVEALMLTATNNVSDPYRALLHAHVLEATERFAFMREQNASSFRRSVLSFLRERGHNAAICKTRWDSSSGVVTAGNYEFIDVVQSGPSTWRQNRYFVDLDFAVQFEIARASNSYSEVLSNVPRIFVGTAEELKRTVLALCEAAKRCFRSKGLSVPPWRKNRFMQEKWFGPYRRTTNPVHGNPVPAVVDGVTGAKCRFVGFNDAVLEARRGGNPCWTRRNMQLLDFSDFETRHRSFWTDKSVGPFESIVIGIGFGITEF* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0830 345 MobiDBLite consensus disorder prediction 24 47 - -
Amo19g0830 345 PANTHER DUF506 FAMILY PROTEIN 2 299 - -
Amo19g0830 345 Pfam PDDEXK-like family of unknown function 52 260 IPR006502 -
Amo19g0830 345 PANTHER OS03G0796600 PROTEIN 2 299 IPR006502 -
Amo19g0830 345 TIGRFAM A_thal_3542: uncharacterized plant-specific domain TIGR01615 132 261 IPR006502 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0830 Amo-Chr19 13533279 13535091 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0830 - - gmx:100805677 418.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g2776 06 92509931 92514419 Amo19g0830 19 13533279 13535091 PCT
Amo19g0830 19 13533279 13535091 Amo06g2776 06 92509931 92514419 PCT