Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g2776 ATGCATCAGAAGAAATCAGAGGTTCAGATCGGAAAAGAAAGCGTTGGCGTCTCTTCCGATTTCAATCCAACACCACCACTACATCACCCATCTTCAATTCACCAGAAACACCATAATCACCACCAAAGCTATCAAGTTTTCCCTCAATTAAGCAGCGCCACACACAACGAGAAAACTGCACCAACAACTGCAACCCAATCATCTGCACCCTACAAGAGACCGTTATTGACCCAAACCCCTTCTACCCTCTCCAAATCCCCAACCCTCCACCAATTCCCAACCACCCCACCCTCCCCTTTCAAGCACCACAACGCCGCCTTCTTCTCCGTCACTATCGCCGCCAGGAGCGCCGCCTACCGGATACTCCGCCGCCTCAAGCACSTCCGRTGCTTCCGCCTCCGCCGCCTTCGGCTCCGACTCCGCGCCGTCCTTCTCCTCTCGCTGCCCCTTTTCTACTTCCTTGTCTCCCACCCGACCCATTCCTTCCTCCTWGACTTCCTCTCCGCCTTCGCCTTCTCCGCCGCGCTCCTCCTCTCCCTCAACCTCGCTGTCCCCCGGCTGCCATCCATCCGCCTCCTCCTCGCCCGCTCCCTCCCCATCGGCCTCAAGGCCCSTTCCTCCCTCTGCAAGCCGGCGCCGACTCTCCCCGTCTTTTGGACCATCGGTTCCCACCAAAAGGTTGCTGCCTCCCCCGACTCTGCCGCCGCCACCACAACGTCCGGGTGCTGGGTGCAGGTCTACGGCAARGGCGACGTCTACGAGGGAGAGTTTCACAAGGGAAAGTGCTGTGGGAGTGGTGTTTATTATTACAGCATGAGTGGSCGGTATGAGGGGGATTGGATTGATGGCAAGTATGATGGGCATGGGGTGGAGACTTGGGCTAGGGGAAGCCGGTACCGGGGGCAGTACCGGCAAGGATTGCGGCACGGTTTTGGTGTGTATAGGTTCTACACTGGGGATGTATATGCTGGAGAGTGGTCTAATGGGCAGAGCCATGGGTGTGGGGTTCATACTTGTGAGGACGGAAGTAGGTATGTTGGGGAATTCAAGTGGGGCGTTAAYCATGGCCTTGGTCACTACCATTTCAGAAATGGGGATACATATGCTGGTGAGTACTTTGCTGACAAGATGCACGGGTTTGGGGTATACCGATTTGCAAATGGCCATCGATATGAAGGAGCCTGGCATGAAGGTCGAAGGCAAGGACTTGGAATGTATACATTTAGAAATGGTGAAACCCAGTCTGGTCACTGGCAAAATGGAGTCCTTGACATCCCCAGCACACATAACACTGCTTATCCAGTTTCTCCTGTGGCTGTCTATCATTCCAAAGTACTCAATGTGGTGCAGGAAGCAAGACGAGCYGCAGAGAAAGCATATGATGTGGCCAAGGTTGATGAAAGGGTGAACAGAGCAGTAGCGGCTGCTAATAGAGCGGCCAATGCAGCTAGAGTAGCRGCAGTCAAGGCTGTACAAATGCAAATGAATCATGTTAACAATGAYAGCTTCCGTATTCCTGTTGTGTAA 1527 0.5377 MHQKKSEVQIGKESVGVSSDFNPTPPLHHPSSIHQKHHNHHQSYQVFPQLSSATHNEKTAPTTATQSSAPYKRPLLTQTPSTLSKSPTLHQFPTTPPSPFKHHNAAFFSVTIAARSAAYRILRRLKHXRCFRLRRLRLRLRAVLLLSLPLFYFLVSHPTHSFLLDFLSAFAFSAALLLSLNLAVPRLPSIRLLLARSLPIGLKAXSSLCKPAPTLPVFWTIGSHQKVAASPDSAAATTTSGCWVQVYGKGDVYEGEFHKGKCCGSGVYYYSMSGRYEGDWIDGKYDGHGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYAGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVNHGLGHYHFRNGDTYAGEYFADKMHGFGVYRFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQNGVLDIPSTHNTAYPVSPVAVYHSKVLNVVQEARRAAEKAYDVAKVDERVNRAVAAANRAANAARVAAVKAVQMQMNHVNNDSFRIPVV* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g2776 508 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 56 499 - -
Amo06g2776 508 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 294 421 - -
Amo06g2776 508 MobiDBLite consensus disorder prediction 42 95 - -
Amo06g2776 508 SMART morn 320 341 IPR003409 -
Amo06g2776 508 SMART morn 389 410 IPR003409 -
Amo06g2776 508 SMART morn 251 272 IPR003409 -
Amo06g2776 508 SMART morn 343 364 IPR003409 -
Amo06g2776 508 SMART morn 297 318 IPR003409 -
Amo06g2776 508 SMART morn 274 295 IPR003409 -
Amo06g2776 508 SMART morn 366 387 IPR003409 -
Amo06g2776 508 MobiDBLite consensus disorder prediction 1 95 - -
Amo06g2776 508 MobiDBLite consensus disorder prediction 12 29 - -
Amo06g2776 508 PANTHER - 56 499 - -
Amo06g2776 508 Pfam MORN repeat 345 367 IPR003409 -
Amo06g2776 508 Pfam MORN repeat 276 298 IPR003409 -
Amo06g2776 508 Pfam MORN repeat 322 344 IPR003409 -
Amo06g2776 508 Pfam MORN repeat 368 390 IPR003409 -
Amo06g2776 508 Pfam MORN repeat 253 273 IPR003409 -
Amo06g2776 508 Pfam MORN repeat 391 412 IPR003409 -
Amo06g2776 508 Pfam MORN repeat 299 321 IPR003409 -
Amo06g2776 508 Gene3D - 283 328 - -
Amo06g2776 508 Gene3D - 237 282 - -
Amo06g2776 508 Gene3D - 375 441 - -
Amo06g2776 508 Gene3D - 329 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g2776 Amo-Chr6 92509931 92514419 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo06g2776 245 434 Acyl Lipid Metabolism Gene Families AT2G41210 34.737 4.34e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo06g2776 - - csv:101207479 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g2776 06 92509931 92514419 Amo19g0830 19 13533279 13535091 PCT
Amo19g0830 19 13533279 13535091 Amo06g2776 06 92509931 92514419 PCT