Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0743 ATGGTGTTACAGTTTCTGAAGCATCCTTTCACCATCTCTCGAGGTTTCCACAGTGACACAACCTTAACTATCCTTTCGCGTTTCCCAACTTTCAATTCTCCAGGTACACCCACTGTCAGCGCTCAAATTCCAACTCCATTTAAGGGATATGCTACTGCGAATTCAGAAAAGGTTTTACCTGTGAAGAAGAAAAAGAGGCTTGATGAAATATGTCTTGAAAAATATCAGCAATATAGCAGATCTATCATCCAGTCATGGATTTTGCAAGGCAAAGTACATGTCAATGGGAAGGTGGTAAATAAAGCTGGTACTCCTGTGTCTGAAAAAGCTGTTGTTGAGATAATTGCCGAAGTTCCGAAATATGTATGTAGGGCGGGACATAAGTTGGAAGCTGCCATTGAACAACTTGGTGTCAATGTTGCTGGTAAAGTTGCTCTTGATTCTGGGCTGTCAACTGGAGGATTTACTGACTGCTTACTTCAGTATGGCGCATCACATGTTTATGGAGTTGATGTAGGCTATGGACAGGTGGCTGAGAAAATTCGTAGAGATGATCGAGTATCTATTATAGAGCGGACAAATTTAAGATATCTTACAGAACTCCCCCAAAATGTTGATTTGGTGACTTTAGACCTTTCATTCATCTCTATTCTCTTGGTCATGCCTGCTGTGGTTAATGTCATGAAGGAGGATGCAGCCTTAGTAACCTTAGTTAAACCACAATTTGAAGCTCGTAGGTCTCAGGTAGGAAAAGGGGGGATAGTGAAAGATCCTAGTATCCATCAAGAGGTTCTTGACAGGATTATAAAGGGAGTAGAGGATTTTGGTTTCTGCAGTAAGGGTTGGATTGAGTCCCCTCTCAAAGGTGCTGAGGGTAACACAGAATTCCTTGTTCACTTCACTAGAACCCCAAAATAA 918 0.4161 MVLQFLKHPFTISRGFHSDTTLTILSRFPTFNSPGTPTVSAQIPTPFKGYATANSEKVLPVKKKKRLDEICLEKYQQYSRSIIQSWILQGKVHVNGKVVNKAGTPVSEKAVVEIIAEVPKYVCRAGHKLEAAIEQLGVNVAGKVALDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVAEKIRRDDRVSIIERTNLRYLTELPQNVDLVTLDLSFISILLVMPAVVNVMKEDAALVTLVKPQFEARRSQVGKGGIVKDPSIHQEVLDRIIKGVEDFGFCSKGWIESPLKGAEGNTEFLVHFTRTPK* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0743 305 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 61 304 IPR004538 GO:0003723
Amo19g0743 305 PANTHER BACTERIAL HEMOLYSIN-LIKE PROTEIN 61 304 - -
Amo19g0743 305 Pfam FtsJ-like methyltransferase 121 299 IPR002877 GO:0008168|GO:0032259
Amo19g0743 305 Pfam S4 domain 66 112 IPR002942 GO:0003723
Amo19g0743 305 Gene3D Vaccinia Virus protein VP39 124 305 IPR029063 -
Amo19g0743 305 CDD AdoMet_MTases 146 225 - -
Amo19g0743 305 ProSiteProfiles S4 RNA-binding domain profile. 65 125 - -
Amo19g0743 305 CDD S4 65 114 - -
Amo19g0743 305 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 302 IPR029063 -
Amo19g0743 305 SUPERFAMILY Alpha-L RNA-binding motif 65 117 - -
Amo19g0743 305 Gene3D - 54 121 IPR036986 GO:0003723
Amo19g0743 305 SMART s4_6 65 130 IPR002942 GO:0003723
Amo19g0743 305 TIGRFAM tly: TlyA family rRNA methyltransferase/putative hemolysin 66 295 IPR004538 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0743 Amo-Chr19 11537293 11542921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0743 K06442 - gmx:100781303 494.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0743 19 11537293 11542921 Amo02g0418 02 5175538 5183495 hybridization