Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0734 ATGGCACCAACAAGGTCTATGATGATGGATAGCCCCTCAGATCTAAATGAATTTGTTATGATCCAAGGAAATGGAGTAAAGGGTCTCTATGAAATGGGCCTAAAAACCCTTCCAAAACAATACATCCAACCATTAGAGGAGAGAATGAGCATGATGACCAATAAAGTTGTGCCTCAAGAATCAATTCCCATAATTGACATGTCCAATAATAATAATAATTGTGATGTGGAAGATGCAATTTGTTATGCAGCTGAAAAATGGGGATTCTTTCAAGTAATCAACCATGGTGTCCCCACACAAGTTCTTGAGAATGTGAAGGATGCAACTTATAGATTCTATGAGTTGGCAGCAGAGGAAAAAGTGAAGTACACAAAAGAGAATTCACCAACTAAGCATGTGAGGTATGGATCAAGCTTTAGCCCTGAAGCTGAGAAGGCTTTGGAGTGGAAAGATTATCTTAGTCTCTTCTATGTTTCTGAGGATGAGGCTATAGCTACATGGCCTTATGCATGCAGGAATGAAGCACTAGAATACATGAAGAAATCCGAAGCTTTAATCAAACGGCTTCTAAATATTTTGATGAAAAGACTAAACGTGAAGGAAATTGATGAAATAAAAGAAGCAGTCTTAATGGGTTCAAAGAGGATCAACCTCAATTACTATCCAGTTTGCCCTAACCATGACCTAACTGTCGCAATAGGGCGCCATTCAGACGTCTCAACTCTAACCATTCTCCTTCAGGACCAAACCGGCGGTCTATTCGTTCGGACCGAGGATCGGTGTGGATGGATCCATGTGCCGCCAATCCCCGGAGCCCTAGTGATCAACATTGGTGATGCACTACAAATAATGAGCAATGGTAGATACAAGAGCATTGAGCATAGAGTTACAGCCAATGGGAGCAAGACTAGGGTTTCTGTGCCAATTTTTGTAAACCCTAGACCTTCAGATGTTATTGGTCCTTTTCTTGAAGTTCTTGCTAGTGATGGGGAGAAGGCAAAGTACAAAAATGTTTTGTATTCAGATTATGTGAAACATTTCTTTAGGAAAGCTCATGATGGAAAGATGACAATTGAATATGCTAAAATAACTTGA 1095 0.4009 MAPTRSMMMDSPSDLNEFVMIQGNGVKGLYEMGLKTLPKQYIQPLEERMSMMTNKVVPQESIPIIDMSNNNNNCDVEDAICYAAEKWGFFQVINHGVPTQVLENVKDATYRFYELAAEEKVKYTKENSPTKHVRYGSSFSPEAEKALEWKDYLSLFYVSEDEAIATWPYACRNEALEYMKKSEALIKRLLNILMKRLNVKEIDEIKEAVLMGSKRINLNYYPVCPNHDLTVAIGRHSDVSTLTILLQDQTGGLFVRTEDRCGWIHVPPIPGALVINIGDALQIMSNGRYKSIEHRVTANGSKTRVSVPIFVNPRPSDVIGPFLEVLASDGEKAKYKNVLYSDYVKHFFRKAHDGKMTIEYAKIT* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0734 364 Gene3D - 15 346 IPR027443 -
Amo19g0734 364 SUPERFAMILY Clavaminate synthase-like 25 354 - -
Amo19g0734 364 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 14 355 - -
Amo19g0734 364 Pfam non-haem dioxygenase in morphine synthesis N-terminal 62 162 IPR026992 -
Amo19g0734 364 PANTHER FERULOYL COA ORTHO-HYDROXYLASE 1-LIKE 14 355 - -
Amo19g0734 364 Pfam 2OG-Fe(II) oxygenase superfamily 218 313 IPR044861 -
Amo19g0734 364 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 212 313 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0734 Amo-Chr19 11425981 11429507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo19g0734 25 363 Glycosyltransferase AT5G59530 35.632 5.29e-61 198
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0734 K06892 - gmx:100527581 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0734 19 11425981 11429507 Amo02g0416 02 5167628 5169646 hybridization