Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo02g0416 ATGAGTTTTCCAAGCAACAAAGTCACACCAATTCCCAAAATAACCAAAATAATTGCACGCACTGAGCTATTATTTCTTAATCCTCATCAAGCTATGGCACCAACAAGGTCTATGATGATGGATAGCCCCTCAGATCTAAATGAATTTGTTATGATCCAAGGAAATGGAGTAAAGGGTCTCTATGAAATGGGCCTAAAAACCCTTCCAAAACAATACATCCAACCACTAGAGGAGAGAATGAGCATGATGACCAATAAAGTTGTGCCTCAAGAATCAATTCCCATAATTGACATGTCCAATAATAATAATAATTGTGATGTGGAAGATGCAATTTGTGATGCCGCTGAAAAATGGGGATTCTTTCAAGTAATCAACCATGGTGTCCCCACACAAGTTCTTGAGAATGTGAAGGATGCAACTTATAGATTCTATGAGTTGGCAGCAGAGGAGAAAGTGAAGTACACAAAAGAGAATTCACCAACTAAGCATGTGAGGTATGGATCAAGCTTTAGCCCTCAAGCTGAGAAGGCTTTGGAGTGGAAAGATTATCTTAGTCTCTTCTATGTTTCTGAGGATGAGGCTATAGCTACATGGCCTTATGCATGCAGGAATGAAGCACTAGAATACATGAAGAAATCCGAAGCTTTAATCAAACGGCTTCTAAATATTTTGATGAAGAGACTAAACGTGAAGGAAATTGATGAAACAAAAGAAGCAGTCTTAATGGGTTCAAAGAGGATCAACCTCAATTACTATCCAGTTTGCCCTAACCATGACCTAACCGTCGCAATAGGGCGCCATTCGGACGTCTCAACTCTAACCATTCTCCTTCAGGACCAAACCGGCGGTCTATTTGTTCGGACCGAGGATCGGCGTGGATGGATCCATGTGCCGCCGATCCCCGGAGCCCTAGTGATCAACATTGGTGATGCACTACAAATAATGAGCAATGGTAGATACAAGAGCATTGAGCATAGAGTTACAGCCAATGGGAGCAAGACTAGGGTTTCTGTGCCAATTTTTGTAAACCCTAGACCTTCAGATGTTATTGGTCCTTTTCTTGAAGTTCTTGCTAGTGATGGGGAGAAGGCAAAGTACAAAAATGTTTTGTATTCAGATTATGTGAAACATTTCTTTAGGAAAGCTCATGATGGAAAGATGACAATTGAATATGCTAAAATAACTTGA 1188 0.4049 MSFPSNKVTPIPKITKIIARTELLFLNPHQAMAPTRSMMMDSPSDLNEFVMIQGNGVKGLYEMGLKTLPKQYIQPLEERMSMMTNKVVPQESIPIIDMSNNNNNCDVEDAICDAAEKWGFFQVINHGVPTQVLENVKDATYRFYELAAEEKVKYTKENSPTKHVRYGSSFSPQAEKALEWKDYLSLFYVSEDEAIATWPYACRNEALEYMKKSEALIKRLLNILMKRLNVKEIDETKEAVLMGSKRINLNYYPVCPNHDLTVAIGRHSDVSTLTILLQDQTGGLFVRTEDRRGWIHVPPIPGALVINIGDALQIMSNGRYKSIEHRVTANGSKTRVSVPIFVNPRPSDVIGPFLEVLASDGEKAKYKNVLYSDYVKHFFRKAHDGKMTIEYAKIT* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo02g0416 395 Gene3D - 46 377 IPR027443 -
Amo02g0416 395 SUPERFAMILY Clavaminate synthase-like 56 385 - -
Amo02g0416 395 PANTHER FERULOYL COA ORTHO-HYDROXYLASE 1-LIKE 45 386 - -
Amo02g0416 395 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 45 386 - -
Amo02g0416 395 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 236 344 IPR005123 -
Amo02g0416 395 Pfam non-haem dioxygenase in morphine synthesis N-terminal 93 192 IPR026992 -
Amo02g0416 395 Pfam 2OG-Fe(II) oxygenase superfamily 249 344 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo02g0416 Amo-Chr2 5167628 5169646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo02g0416 56 385 Glycosyltransferase AT5G59530 35.988 2.49e-59 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo02g0416 K06892 - gmx:100527581 587.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0734 19 11425981 11429507 Amo02g0416 02 5167628 5169646 hybridization