Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0238 ATGGTGAAGGCATTGGAACAAGAACATGAAAGTTATAAATCCAAACTATTCCATTTCAAAGGAATGTTTGAGAACACAGGTAGGCATACAAAAAGTTTGAGCATTGAGAGTGCTAGCAAATTGGATGTTACTGAAGAAGATATAGTTTCATCAAAGAGTCAAGGATCAAAGCTCAATGAATTAGATAAAAACAAAAACAACAACAACAATAATAATAAGAGTCCTGCTGCTACTCCAGCTAAGCCAAGGGTTATGAGCAAGGAAGAAATTGAACTCAAAGAACAAAAAGACAAGCTACTGCAGGAAATGGAACAAATGAAGGAGAGATTTGCAAAGTTGCTATTGGGTGAAGATATGTCTGGTGGTGGAAAAGGTGTTTCATCTGCATTGGCCTTGTCAAATGCATTCACAAATCTTGCAGCTTCAATTTTCGGAGAGCAACGACGCCTAGAGCCGATGCCTCCGGAGAGGAAAGCAAAGTGGAAGAAAGAAATTGATTGGCTTCTATCAGTTACTGAATACATTGTTGAAATGGATGCTTCGGATGATTCGGAGAAAGATGGAGGAAAGAATGATGACAAGTGGTGGTTGCCTACACCTAAGGTTCCAGTAGATGGTTTATCTGAGGCATCAAGAAGGTTTCTGCAGTACCAAAAAGATAGTGTCAACCAAGTCCTCAAAGCAGCCATGGCCATAAATGCTCAAACTCTATCAGAAATGGAGATCCCTGAAAGCTACATTGATTCCCTACCCAAGAATGGAAGATCAAGTCTAGGTGAATCGATCTACCGGAGCATTACAGTTGAATTTTTCGATCCGGACCAGTTCCTATCAACTGTGGACTTGTCATCAGAACACAAGATCCTTGATCTGAAGAACAGAATTGAGGCTTCAATGGTAATTTGGAGGAGGAAGATGAACCAAAAGGACTCAAAATCATCTTGGAGTTCTGCTGTGAGTCTGGAGAAAAGAGAACAATTTGAAGACAGAGCAGAAACCATCTTGCTTCTCATTAAGCATCGTTTCCCCGGAGCTCCTCAATCTGCATTGGATATAAGCAAAATCCAATTCAACAGGGATGTGGGGCAAGCTTGTCTCGAAAGCTATTCAAGAATATTGGAAAGTTTGGCCTATACAGTGCTTTCAAGAATAGAAGATGTACAATATGCAGATCAACAAACTCAAAATCCTAGGAAGAGTAATGCTGCAAAGAGCTCAATTCCAAGGGCTCCAACAACTCCTAAAGATGATGCAGACAGTGGTTCGATGACTCTCTCGGATTTCATGGGTTGGAATGGTGGTGATCACAGTAATAAGGATCCTTTCGCGGCTACAGACGACTTCTACAAGGATATTGACAATGGAAAAGGCCAGAAGCTTCCAAATGTAACGACTGATAAGAAGGTTTCCTATCTTGATTCCTTGGGAGGTATGAGAAGTCCAACTTCACGCCATTAA 1458 0.4095 MVKALEQEHESYKSKLFHFKGMFENTGRHTKSLSIESASKLDVTEEDIVSSKSQGSKLNELDKNKNNNNNNNKSPAATPAKPRVMSKEEIELKEQKDKLLQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAASIFGEQRRLEPMPPERKAKWKKEIDWLLSVTEYIVEMDASDDSEKDGGKNDDKWWLPTPKVPVDGLSEASRRFLQYQKDSVNQVLKAAMAINAQTLSEMEIPESYIDSLPKNGRSSLGESIYRSITVEFFDPDQFLSTVDLSSEHKILDLKNRIEASMVIWRRKMNQKDSKSSWSSAVSLEKREQFEDRAETILLLIKHRFPGAPQSALDISKIQFNRDVGQACLESYSRILESLAYTVLSRIEDVQYADQQTQNPRKSNAAKSSIPRAPTTPKDDADSGSMTLSDFMGWNGGDHSNKDPFAATDDFYKDIDNGKGQKLPNVTTDKKVSYLDSLGGMRSPTSRH* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0238 485 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 186 485 IPR038937 GO:0005085
Amo19g0238 485 Gene3D PRONE domain, subdomain 1 107 392 - -
Amo19g0238 485 ProSiteProfiles PRONE domain profile. 93 401 IPR005512 GO:0005085
Amo19g0238 485 MobiDBLite consensus disorder prediction 48 77 - -
Amo19g0238 485 MobiDBLite consensus disorder prediction 440 485 - -
Amo19g0238 485 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 101 189 IPR038937 GO:0005085
Amo19g0238 485 MobiDBLite consensus disorder prediction 391 408 - -
Amo19g0238 485 Coils Coil 85 116 - -
Amo19g0238 485 MobiDBLite consensus disorder prediction 44 86 - -
Amo19g0238 485 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 101 190 IPR005512 GO:0005085
Amo19g0238 485 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 190 395 IPR005512 GO:0005085
Amo19g0238 485 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 186 485 - -
Amo19g0238 485 MobiDBLite consensus disorder prediction 391 426 - -
Amo19g0238 485 Gene3D PRONE domain, subdomain 2 241 357 - -
Amo19g0238 485 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 101 189 - -
Amo19g0238 485 MobiDBLite consensus disorder prediction 440 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0238 Amo-Chr19 2762146 2764453 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0238 - - gmx:100777496 658.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0238 19 2762146 2764453 Amo19g0238 19 2762146 2764453 ECH
Amo19g0238 19 2762146 2764453 Amo09g0063 09 724722 726038 hybridization