Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0063 ATGGCTGAGCAGGAATGTTTAGATGGCTTCCAAGAGAAGCAAGAGTTCTATTATGTAAAGAAGGATGCTTCGGATGATTCGGAGAAAGATGGAGGAAAGAATGATGACAAGTGGTGGTTGCCTACACCTAAGGTTCCAGTAGATGGTTTATCTGAGGCATCAAGAAGGTTTCTGCAGTACCAAAAAGATAGTGTCAACCAAGTCCTCAAAGCAGCCATGGCCATAAATGCTCAAACTCTATCAGAAATGGAGATCCCTGAAAGCTACATTGATTCCCTACCCAAGAATGGAAGATCAAGTCTAGGTGAATCGATCTACCGGAGCATTACAGTTGAATTTTTCGATCCGGACCAGTTCCTATCAACTGTGGACTTGTCATCAGAACACAAGATCCTTGATCTGAAGAACAGAATTGAGGCTTCAATGGTAATTTGGAGGAGGAAGATGAACCAAAAGGACTCAAAATCATCTTGGAGTTCTGCTGTGAGTCTGGAGAAAAGAGAACAATTTGAAGACAGAGCAGAAACCATCTTGCTTCTCATTAAGCATCGTTTCCCCGGAGCTCCTCAATCTGCATTGGATATAAGCAAAATCCAATTCAACAGGGATGTGGGGCAAGCTTGTCTCGAAAGCTATTCAAGAATATTGGAAAGTTTGGCCTATACAGTGCTTTCAAGAATAGAAGATGTACAATATGCAGATCAACAAACTCAAAATCCTAGGAAGAGTAATGCTGCAAAGAGCTCAATTCCAAGGGCTCCAACAACTCCTAAAGATGATGCAGACAGTGGTTCGATGACTCTCTCGGATTTCATGGGTTGGAATGGTGGTGATCACAGTAATAAGGATCCTTTCGCGGCTACAGACGACTTCTACAAGGATATTGACAATGGAAAAGGCCAGAAGCTTCCAAATGTAACAACTGATAAGAAGGTTTCCTATCTTGATTCCTTGGGAGGTATGAGAAGTCCAACTTCACGCCATTAA 987 0.4225 MAEQECLDGFQEKQEFYYVKKDASDDSEKDGGKNDDKWWLPTPKVPVDGLSEASRRFLQYQKDSVNQVLKAAMAINAQTLSEMEIPESYIDSLPKNGRSSLGESIYRSITVEFFDPDQFLSTVDLSSEHKILDLKNRIEASMVIWRRKMNQKDSKSSWSSAVSLEKREQFEDRAETILLLIKHRFPGAPQSALDISKIQFNRDVGQACLESYSRILESLAYTVLSRIEDVQYADQQTQNPRKSNAAKSSIPRAPTTPKDDADSGSMTLSDFMGWNGGDHSNKDPFAATDDFYKDIDNGKGQKLPNVTTDKKVSYLDSLGGMRSPTSRH* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0063 328 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 5 238 IPR005512 GO:0005085
Amo09g0063 328 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 5 328 IPR038937 GO:0005085
Amo09g0063 328 MobiDBLite consensus disorder prediction 21 40 - -
Amo09g0063 328 MobiDBLite consensus disorder prediction 234 269 - -
Amo09g0063 328 MobiDBLite consensus disorder prediction 283 297 - -
Amo09g0063 328 MobiDBLite consensus disorder prediction 21 37 - -
Amo09g0063 328 Gene3D PRONE domain, subdomain 1 22 235 - -
Amo09g0063 328 MobiDBLite consensus disorder prediction 234 251 - -
Amo09g0063 328 ProSiteProfiles PRONE domain profile. 1 244 IPR005512 GO:0005085
Amo09g0063 328 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 5 328 - -
Amo09g0063 328 MobiDBLite consensus disorder prediction 283 328 - -
Amo09g0063 328 Gene3D PRONE domain, subdomain 2 84 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0063 Amo-Chr9 724722 726038 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0063 - - gmx:100812078 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0238 19 2762146 2764453 Amo09g0063 09 724722 726038 hybridization