Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo19g0179 ATGTCTTCTTCTTTGAGATACACCATGTCCAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATTCTAATTCAGCATTTGATGAACAAAGATGGGTGATTAACATCCGAAAAACCCTTGAAGAAGAACTAGAAGAAGAAGGTGATGAATTTGAAGTACACATATTCAATGTTCCAAAGCTTCTAATGGCAAGTGATCCAGATTCATATGTTCCTCAACAAGTTGCAATTGGTCCTTATCATTATTGGCGTCCAGAGCTGTATGAAATGCAAAGGTACAAGGTTGCAGCTGCAAAAAGGTTCCAACAACAACACCTTCAATGTCTTAAATTTGAAGGGCTTGTTGATCAAATTCTCAAGTTGGAGCGCAAGATTAGAAGATGCTATCACAAGTACTTGGATTTCAATGGTGAAACCTTGGTTTGGATGATGGCTGTTGATGCCTCATTCTTGCTTGAGTTCCTTCAAATCTATGCCATACAAGAAGGATCAAAGATTCCTGGAGTTTCATCAAGCATGTCGCACTTGGTAGACTATGCAGGCAAGAAATCAGCACATAATGCAATCTTGAGGGACATTGTGATGTTGGAGAACCAAATCCCATTCTTTGTGTTAAGAAAGATGTTGGAGTTCAAATTCTCATCACTAGAAGCTGCTGATGACATGCTTAGCTTGATCCTCATAGGGCTATTCAAAGAGCTCTCACCTTTCAAGACCATGGAACATTATCCAAACAATGAAGTCTCAAAGAGTGTTCACATTCTAGATTACTTGTATGACATGGTTGTTCCAAGACTAGACCAAGAAATAATTGAAGAGGAAAATTATTACCATCAAGATGGAGAGAAAGATGGGAATGATGATGATGAGAAAATAGAAGAGGAGAAAGGGAATGTCAAGAAGTTCCTTAGTGAAGTTTGGAATATTCTTTCAAAATTGAATAAAGGGCCTGTGAGATCAATCAAAAGGGTACTAGTTTCTAAACCTCTTAAGCTTGTTGTTAAGTTACCATGGCAAATTATATCGAATTTTCCGGGTCTTAAGCTTGTTAAAGAGCCTCTCGAGCGAATGTTTTTCGCTCGAGAGAAAGGCGACGGCGAAGAAGAAGATGAGAAAAAGAAAAACGGAGGCTCGTCGAGTGCGAAAAGCGACGAGCCTCCGTTGATAGAGGAAATCACTATTCCTTCAGTGTCAGAATTATTAAATTCGGGGGTTCGATTCTCGCCTATGAACGGATGCATATCAAGTATTAATTTTGATGCAAAAACATGCACACTCTACCTCCCAATAATTTCTTTGGATGTTAACACTGAAGTTTTCTTGAGAAACTTGGTTGCATATGAAGCTTCAGGTTCATCAGGACAATTGGTTGTAGCACGTTACACTGAATTGATGAATGGGATTATAGACACTGAGGAAGATGCAAAGATTCTAAGGGAAAGAGGGATTGTTTTGAACCACTTGAAGAGTGATTTGGAAGTTGCTAACATATGGAATGGTATGAACAAGTCTTTGAGGTTGAGCAAGGTTCCAAAATTGGACAAYGTTATTGAAGATGTTAACAAGTTTTACAGTGGAACAACCAAGGTTAAGGTTAAGAAATTCATGAAGGTTTATGTGTTTGGTTCATGGCAGTTCTTGACATTGTTAGCTGCCATATTCATGTTGTTCTTGATGGCATTGCAAGCATTTTGTTCAGTCTACACTTGTAGTCGCTTTTTCGAATCAGCACTACAATCATCTTCTAATACTAGTAGTGGAGGAGAATAA 1785 0.3742 MSSSLRYTMSNNNNNNNNNNNNNNNNNSNSAFDEQRWVINIRKTLEEELEEEGDEFEVHIFNVPKLLMASDPDSYVPQQVAIGPYHYWRPELYEMQRYKVAAAKRFQQQHLQCLKFEGLVDQILKLERKIRRCYHKYLDFNGETLVWMMAVDASFLLEFLQIYAIQEGSKIPGVSSSMSHLVDYAGKKSAHNAILRDIVMLENQIPFFVLRKMLEFKFSSLEAADDMLSLILIGLFKELSPFKTMEHYPNNEVSKSVHILDYLYDMVVPRLDQEIIEEENYYHQDGEKDGNDDDEKIEEEKGNVKKFLSEVWNILSKLNKGPVRSIKRVLVSKPLKLVVKLPWQIISNFPGLKLVKEPLERMFFAREKGDGEEEDEKKKNGGSSSAKSDEPPLIEEITIPSVSELLNSGVRFSPMNGCISSINFDAKTCTLYLPIISLDVNTEVFLRNLVAYEASGSSGQLVVARYTELMNGIIDTEEDAKILRERGIVLNHLKSDLEVANIWNGMNKSLRLSKVPKLDNVIEDVNKFYSGTTKVKVKKFMKVYVFGSWQFLTLLAAIFMLFLMALQAFCSVYTCSRFFESALQSSSNTSSGGE* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo19g0179 594 MobiDBLite consensus disorder prediction 366 384 - -
Amo19g0179 594 Pfam Plant protein of unknown function 60 563 IPR004158 -
Amo19g0179 594 MobiDBLite consensus disorder prediction 1 30 - -
Amo19g0179 594 MobiDBLite consensus disorder prediction 366 390 - -
Amo19g0179 594 PANTHER UPF0481 PLANT-LIKE PROTEIN 25 576 - -
Amo19g0179 594 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 25 576 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo19g0179 Amo-Chr19 1956534 1960622 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo19g0179 - - adu:107463716 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0179 19 1956534 1960622 Amo19g0179 19 1956534 1960622 ECH
Amo19g0179 19 1956534 1960622 Amo09g0008 09 90462 93202 hybridization