Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo09g0008 ATGTCTTCTTCTTTGAGATACACCATGTCCAATAATAATAATAATAATAATAATAATAATTCTAATTCAGCATTTGATGAACAAAGATGGGTGATTAACATCCGAAAAACCCTTGAAGAAGAACTTGAAGAAGAAGGTGATGAATTTGAAGTACACATATTCAATGTTCCAAAGCTTCTAATGGCAAGTGATCCAGATTCATATGTTCCTCAACAAGTTGCAATTGGTCCTTATCATTATTGGCGTCCAGAGCTGTATGAAATGCAAAGGTACAAGGTTGCAGCTGCAAAAAGGTTCCAACAACACCTTCAATGTCTTAAATTTGAAGGGCTTGTTGATCAAATTCTCAAGTTGGAACGCAAGATTAGAAGATGCTATCACAAGTACTTGGATTTCAATGGTGAAACCTTGGTTTGGATGATGGCTGTTGATGCCTCATTCTTGCTTGAGTTCCTTCAAATCTATGCCATACAAGAAGGAACAAAGATTCCTGGAGTTTCATCAAGCATGTCGCACTTGGTAGACTATGCCGGCAAGAAATCAGCACATAATGCAATCTTGAGGGACATTGTGATGTTAGAGAACCAAATCCCATTCTTTGTGTTAAGAAAGATGTTGGAGTTCAAATTCTCATCACTAGAAGCTGCTGATGACATGCTTAGCTTGATCCTCCTAGGGCTATTCAAAGAGCTCTCACCCTTCAAGACCATGCAACATTATTATCCAAACAATGAAATCTCAAAGAGTGTTCACATTCTAGATTACTTGTATGACATGATTGTTCCAAGATTAGACCAAGAAATAATTGAAGAGGAAAATTATTACCATCAAGATGGAGAGAGAGATGGGAATGATGATGAGAAAATAGAAGAGGAGAAAGGGAATGTCAAGAAATTTCTTAGTGAAGTTTGGAATATTCTTTCAAAATTGAATAAAGGGCCTGTGAGATCAATCAAAAGGGTATTAGTTTCTAAACCTCTTAAGCTTGTTGTTAAGTTACCATGGCAAATTATATCGAATTTTCCGGGTCTTAAGCTTGTTAAAGAGCCTCTCGAGCGAATGTTCTTTGCTCGAGAGAAAGGTGACGAAGAAGATGAGAAAAAGAAAAACGGAGGCTCGTCGAGTGCGAAAAGCGAAGAGCCTCCGTTGATAGAGGAAATCACTATTCCTTCAGTGTCAGAATTATTGAATTCGGGGGTTCGATTCTCGCCTGTCAACGGATGCATATCAAGTATTAATTTTGATGCAAAAACATGCACACTCTACCTTCCAATAATTTCTTTGGATGTTAACACTGAAGTTTTCTTGAGAAACTTGGTTGCATATGAAGCTTCAAGTTCTTCAGGACAATTGGTTGTAGCACGTTACACTGAATTGATGAATGGGATTATAGACACTGAGGAAGATGCAAAGATTCTAAGGGAAAGAGGGATTGTTTTGAACCACTTGAAGAGTGATTTGGAAGTTGCTAACATATGGAATGGTATGAACAAGTCTTTGAGGTTGAGCAAGGTTCCAAAATTGGACAAAGTTATTGAAGATGTTAACAAGTTTTACAGTGGAACAACCAAGGTTAAGGTTAAGAAATTCATGAAGGTTTATGTGTTTGGTTCATGGCAGTTCTTGACATTGTTAGCTGCCATATTCATGTTGTTCTTGATGGCATTGCAAGCATTTTGCTCAGTCTATACTTGTAGTCGCTTTTTTGAATCAGCACTACAATCATCTTCTAATACTAGTAGTGGAGGAGAATAA 1755 0.3732 MSSSLRYTMSNNNNNNNNNNSNSAFDEQRWVINIRKTLEEELEEEGDEFEVHIFNVPKLLMASDPDSYVPQQVAIGPYHYWRPELYEMQRYKVAAAKRFQQHLQCLKFEGLVDQILKLERKIRRCYHKYLDFNGETLVWMMAVDASFLLEFLQIYAIQEGTKIPGVSSSMSHLVDYAGKKSAHNAILRDIVMLENQIPFFVLRKMLEFKFSSLEAADDMLSLILLGLFKELSPFKTMQHYYPNNEISKSVHILDYLYDMIVPRLDQEIIEEENYYHQDGERDGNDDEKIEEEKGNVKKFLSEVWNILSKLNKGPVRSIKRVLVSKPLKLVVKLPWQIISNFPGLKLVKEPLERMFFAREKGDEEDEKKKNGGSSSAKSEEPPLIEEITIPSVSELLNSGVRFSPVNGCISSINFDAKTCTLYLPIISLDVNTEVFLRNLVAYEASSSSGQLVVARYTELMNGIIDTEEDAKILRERGIVLNHLKSDLEVANIWNGMNKSLRLSKVPKLDKVIEDVNKFYSGTTKVKVKKFMKVYVFGSWQFLTLLAAIFMLFLMALQAFCSVYTCSRFFESALQSSSNTSSGGE* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo09g0008 584 Pfam Plant protein of unknown function 53 553 IPR004158 -
Amo09g0008 584 PANTHER PROTEIN, PUTATIVE (DUF247)-RELATED-RELATED 18 566 IPR004158 -
Amo09g0008 584 MobiDBLite consensus disorder prediction 358 374 - -
Amo09g0008 584 MobiDBLite consensus disorder prediction 1 23 - -
Amo09g0008 584 MobiDBLite consensus disorder prediction 358 381 - -
Amo09g0008 584 PANTHER UPF0481 PLANT-LIKE PROTEIN 18 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo09g0008 Amo-Chr9 90462 93202 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo09g0008 - - adu:107463716 1045.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g0179 19 1956534 1960622 Amo09g0008 09 90462 93202 hybridization